Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2753 ATGGAATCTGGTGGGAGGCTTTTCTTTGATCCATCTGCTTGTAGGGGGAACAACAACATGCTCTTCCTTGGCACTACTGCTGATCTCGCTTTTCGAGGAAGGTCGATCCTGAGCATGGATGAAAGCTCAAAGAGGCGACCTTTCTTCAGCTCACCGGATGATCTGTTTGATGATGAGTACTATGAGGAGCAGCTTCCAGAAAAGAAGCGCCGCCTCACTTCCGAACAGGTCAATCTGTTGGAGAAAAGCTTCGAGGAAGAGAACAAGCTGGAGCCAGAGAGGAAAACCCAGCTGGCGAAGAAGCTGGGGTTGCAGCCGAGGCAGGTGGCAGTGTGGTTCCAGAACCGCAGGGCTCGGTGGAAGACCAAGCAACTTGAAAGGGATTATGATGTTCTCAAGGCTTCCTATGATTCCCTACTTTCAACATATGATTCCATTGTGAAGGAGAATGAAAAGCTCAAATCTGAGGTGGTATCCTTGAATGAAAAGCTTCAATTGCAAGCTAAAGATATGCCAGGGGAGCCAATATCGGACAACAAAGCCGAACCGCTTCCAGTTGAGATAGCTCAAATCATCAGCATGAAAGTTGAGGATCGGCTGAGCACTGGGAGTGTTGGAAGCGCCGTGGTTGATGAGGGTAGTAGTCCACAGCTTGTTGTTGAGAGTGTTGATTCATACTTTCCTGCTGAGAACTATGGCGGCAATAGCGGCAATAGCATGGCCCCAATTGAGAGGGTTCAGTCAGAGGAGGAGGATGGGAGTGATGATGGGAGGAGTATCTTCTCAGATGTTTTTGTTGCTGCTGAAGCTGAGCAACAGAACCAAGAAGAAGGGGAGGTATTGCGTTGGTGGGGTAATATTATGTTGAATAATGCAGCAGTGCTTTTCTAA 891 0.4826 MESGGRLFFDPSACRGNNNMLFLGTTADLAFRGRSILSMDESSKRRPFFSSPDDLFDDEYYEEQLPEKKRRLTSEQVNLLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDVLKASYDSLLSTYDSIVKENEKLKSEVVSLNEKLQLQAKDMPGEPISDNKAEPLPVEIAQIISMKVEDRLSTGSVGSAVVDEGSSPQLVVESVDSYFPAENYGGNSGNSMAPIERVQSEEEDGSDDGRSIFSDVFVAAEAEQQNQEEGEVLRWWGNIMLNNAAVLF* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2753 296 PRINTS Lambda-repressor HTH signature 94 103 IPR000047 GO:0003677
Ahy5g2753 296 PRINTS Lambda-repressor HTH signature 103 119 IPR000047 GO:0003677
Ahy5g2753 296 CDD homeodomain 68 124 IPR001356 GO:0003677
Ahy5g2753 296 Gene3D - 61 130 - -
Ahy5g2753 296 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 2 268 IPR045224 GO:0003700
Ahy5g2753 296 MobiDBLite consensus disorder prediction 231 258 - -
Ahy5g2753 296 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT5 2 268 - -
Ahy5g2753 296 SUPERFAMILY Homeodomain-like 57 125 IPR009057 -
Ahy5g2753 296 Pfam Homeodomain 68 121 IPR001356 GO:0003677
Ahy5g2753 296 ProSitePatterns 'Homeobox' domain signature. 98 121 IPR017970 GO:0000981|GO:0006355
Ahy5g2753 296 SMART HOX_1 66 127 IPR001356 GO:0003677
Ahy5g2753 296 Coils Coil 143 170 - -
Ahy5g2753 296 ProSiteProfiles 'Homeobox' domain profile. 63 123 IPR001356 GO:0003677
Ahy5g2753 296 Pfam Homeobox associated leucine zipper 123 165 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2753 Ahy-Chr5 105891794 105894932 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2753 1 285 Homeobox Transcription Factor Family AT3G01470 58.276 6.23e-97 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Ahy5g2753 Homeodomain 6.80E-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2753 K09338 - gmx:100797836 400.593