Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2748 ATGGCTAACTTGGAAATAGAAGAGGAGCCAATGCTGTCACCTCCACAACGATCTCATGGACTCCAGGGTTCGGATTTTCGGGCCCGAAGCAGGTCTATGCACATTCCCATGGTCTCCCACCGAGAAGCAACTCGTACACTTGATAGTGTGAAAACCTTTCCCCAGAAGAAGAGTGCTTCATCGTCATTCTATTCCACTGCCACTCATGAAACTCTACATCTTTCTTCGTCCCGCCGCGGCGGTGGCCCACTTAGATGGCATCGTGCTATGACAGGAAGGCTTCAATATAATCCTCTTCAAGCAGAGTTTGATAGTATTTTTGAGGGTTCTGCTTGGAGAGTCCCTTCATTCTGCTCTTCATGTGTTCCTGGAGTTATACATCCTGACAGTGTAAAACAATGGAACAAGATTATAGCTATTTTAAGCTTGGTGGCAATATTTTTGGATCCATTATTTTTCTTCTTATTGTATGTTGAAAAGCATTTGAATTGCATTGTTATCAGTTGGACAATGACGAGACCACTTATTTTACTTAGAAGCATAAATGATTTAGTATATTTCATGAACATGCTTCTCCAGTTTAGGTTGGCTTATGTTTCTGCCGGGTCAAGGTTAAGGGGTACTGATTTAATTGATGATCCAAAGAAAATTGCTCGACATTACCTGACTAGTTATTTCTTTCTTGATTTGTTTATTGCACTTCCTCTACCACAGGTTGCCTCAAATCCAACATTCCATGTGAGAATCAAGCATAAAAAAGTAGATTATCATGTCATTAGAGCAAAGGTTCAATCTGGATTCATTGTGACTCACTTTGTGAATTCCATTGATCAATTAGTAGATATCACAAAGTCTATTAGGAACTTCGATGTACATTATGTGCGGATCACAGTATTGTTTCTGCTGCCAAATGTGCAGATAATAGTATTGTTTGTGCTGCCAAGATATTTCGGAGCGAGTCATGCTGAGAGTCTTTTATGTGGAGTGATCCTTGTGCAGTATATCCCCAGGTTATTCCGATTTTTGCCTCTGCTAATTGTCCAGTCTCCAGAAGGATTCATATTTGAGTCAGCATGGGCAAATTTTTTTATAAATATCCTCATTTTTATACTATCTGGACATGTCGTTGGCTCTTGTTGGTACCTCTTTGGTTTGCAGAGGGTTAATCAATGTTTGCGAGATGCCTGCCATAATTCAGTTGTTACTCAATGCATGAAGATTATTGATTGTGGGTATGACCGTTTCTCACACTATACATCATCAGATTCAGAAATGTGGAGAAACAATGCAAATGCAACTGCTTGTTTGAATTCCTCTTCTGGTGCTTTTGATTATGGGATATACGCCAATGTTGTACAACTTACTACGCATCCTAAAATAGTCAAGAAGTATCTGTATGCACTGTATTGGGGCTTCCAACAAATCAGTACCCTTGCTGGTAATCAAACCCCTAGTGATTTTGAGTTCGAAGTCCTTTTCATAATGGCAATCACAGGAATAGGACTCTTGCTTTTTGCACTTTTGATCGGAAACATACAAAACTATCTTCAAGCTCTCGGTCAGAGGACACTAGAAATGCAACTTAGAGGCCGTGATGTTGAGCAATGGATGAGCCAGTTTCACTTACCAGAAGATCTTAGAAGGAAAATAAGACATGTTGAACGGTATAATTGGGCTGCAACAATAGGGGTGAATGCGGAAATGCTTATGGAGAATATGCCAGAAGATCTCCAAAGAGACATAAGGCGTCATCTCTTCAGATTCATTAAGAGAGTTCGAATTTTTTCTATGATGGACGAGCCTATTTTAGATGCCATTTGTGAGAAGTTAAGACACAAGATATACATCAAAGGAAGCAATATCTTGTATAATGGTGGTCTAGTGGAGAAGATGGTGTTTGTTATGCATGGGAAATTGGAGAGCATCGAAGGAGAAGATGGAATTAGAATTAGCTTAACCCAAGGGGATGCTTGTGGTGAAGAACTCTTGCAGTGGTGTTTGGAGAATTCATTACTCTACACAGCAAGCAGAAAACCAGAAAAAGTCTTGCGTAGTGAAAGGACAGTAAGGGCCTTAACAAATGTGGAGGTGTTTTCACTCCGAGCTGATGACCTTGAAGAAGTAATAATTCGTTTCTCAAGATTATTTCAAAGACCACGTGTTCAAGCAGCCCTAAGGTATGAATCACCTTATTGGAGATCCCTTGCTGCAACACGGATTCAGATGGCGTGGCGAAACAGGAAGAACCGTTTAAATCAAATTCAGGTCTAA 2271 0.402 MANLEIEEEPMLSPPQRSHGLQGSDFRARSRSMHIPMVSHREATRTLDSVKTFPQKKSASSSFYSTATHETLHLSSSRRGGGPLRWHRAMTGRLQYNPLQAEFDSIFEGSAWRVPSFCSSCVPGVIHPDSVKQWNKIIAILSLVAIFLDPLFFFLLYVEKHLNCIVISWTMTRPLILLRSINDLVYFMNMLLQFRLAYVSAGSRLRGTDLIDDPKKIARHYLTSYFFLDLFIALPLPQVASNPTFHVRIKHKKVDYHVIRAKVQSGFIVTHFVNSIDQLVDITKSIRNFDVHYVRITVLFLLPNVQIIVLFVLPRYFGASHAESLLCGVILVQYIPRLFRFLPLLIVQSPEGFIFESAWANFFINILIFILSGHVVGSCWYLFGLQRVNQCLRDACHNSVVTQCMKIIDCGYDRFSHYTSSDSEMWRNNANATACLNSSSGAFDYGIYANVVQLTTHPKIVKKYLYALYWGFQQISTLAGNQTPSDFEFEVLFIMAITGIGLLLFALLIGNIQNYLQALGQRTLEMQLRGRDVEQWMSQFHLPEDLRRKIRHVERYNWAATIGVNAEMLMENMPEDLQRDIRRHLFRFIKRVRIFSMMDEPILDAICEKLRHKIYIKGSNILYNGGLVEKMVFVMHGKLESIEGEDGIRISLTQGDACGEELLQWCLENSLLYTASRKPEKVLRSERTVRALTNVEVFSLRADDLEEVIIRFSRLFQRPRVQAALRYESPYWRSLAATRIQMAWRNRKNRLNQIQV* 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2748 756 Pfam Ion transport protein 134 523 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Ahy5g2748 756 Gene3D Helix hairpin bin 523 586 - -
Ahy5g2748 756 SUPERFAMILY cAMP-binding domain-like 521 718 IPR018490 -
Ahy5g2748 756 ProSiteProfiles cAMP/cGMP binding motif profile. 594 718 IPR000595 -
Ahy5g2748 756 SMART cnmp_10 594 727 IPR000595 -
Ahy5g2748 756 Gene3D Jelly Rolls 592 714 IPR014710 -
Ahy5g2748 756 SUPERFAMILY Voltage-gated potassium channels 131 243 - -
Ahy5g2748 756 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 107 241 - -
Ahy5g2748 756 MobiDBLite consensus disorder prediction 1 27 - -
Ahy5g2748 756 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 279 754 - -
Ahy5g2748 756 CDD CAP_ED 594 709 IPR000595 -
Ahy5g2748 756 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 107 241 - -
Ahy5g2748 756 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 279 754 - -
Ahy5g2748 756 SUPERFAMILY Voltage-gated potassium channels 336 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2748 Ahy-Chr5 105698214 105707255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2748 99 670 Ion Channels AT3G17700 48.718 5.17e-175 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2748 K05391 - gmx:100785556 642.499