Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2721 ATGTGGCTAGCAATTGTGTTCATGTTATTGGCCAACAATTGCTCTGAGATGGCCGATGCACACGAGACTGACAAGAACATTGAGATTTGGAAGATCAAGAAATTGATCAAAGCTCTCGAGGCTGCTAGAGGAAATGGGACAAGTATGATTTCCCTTATCATGCCCCCACGAGATCAAATATCTCGAGTTACCAAGATGCTTGGTGATGAGTTTGGTACTGCTTCCAACATCAAGAGCAGGGTGAACCGGCAGTCTGTGCTTGGGGCCATCACCTCTGCCCAGCAGAGGCTCAAGCTCTATAACAAGGTTCCTCCAAACGGGCTTGTGCTGTATACTGGCACGATTGTTACTGAAGATGGGAAGGAAAAGAAGGTTACTATTGATTTTGAGCCTTTCAGACCTATCAATGCTTCCCTCTATCTGTGTGACAACAAGTTTCATACTGAGGCACTAAATGAGCTTTTGGAGTCAGATGACAAGTTTGGGTTCATTGTCATGGATGGCAATGGTACCCTGTTTGGGACCTTGAGTGGTAACACAAGGGAAGTGCTTCATAAATTCAGTGTCGATCTCCCAAAGAAGCACGGAAGAGGAGGGCAATCAGCTCTTCGATTTGCCCGTCTTCGCATGGAGAAACGTCATAACTATGTCAGGAAGACTGCAGAGCTTGCAACTCAGTTTTATATCAATCCAGCTACCAGCCAGCCAAATGTTTCTGGATTAATACTTGCTGGTTCAGCTGATTTCAAAACTGAGCTTAGTCAGTCTGATATGTTTGATCCTCGACTCCAAGCAAAAATTCTCAATGTTGTAGATGTTTCCTATGGTGGTGAAAATGGGTTTAATCAGGCTATTGAACTTTCATCTGAGATTCTGTCCAATGTGAAATTTATCCAGGAGAAACGCTTGATTGGAAAATATTTTGAGGAAATTAGCCAGGATACTGGGAAATATGTTTTTGGGGTTGAGGATACTTTGAAAGCTTTGGAGATGGGAGCTGTTGAGACACTCATTGTGTGGGAAAATTTGGATATGAGTAGGTTTGTCTTGAAAAACAGTGCTACTGGTGAGGTTGTCATTCAACACTTCAACAAGGAACAAGAGGCCAATCAGAGCAACTTCCGGGATCCTGTATCCAATGCTGATTATGAGGTGCAGGAAAAAATCTCTCTTTTGGAGTGGTTTGCAAATGAATACAGGCGGTTTGGTTGCACTCTTGAGTTTGTCACAAATAAGTCGCAAGAAGGTTCACAATTTTGTAGAGGTTTTGGTGGGATTGGTGGTATCTTGCGCTACCAGCTGGACATGAGGACATTTGATGATTTCTCTGAAGATGATGCTGTCTATGAATCTGAATAG 1359 0.4312 MWLAIVFMLLANNCSEMADAHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVEDTLKALEMGAVETLIVWENLDMSRFVLKNSATGEVVIQHFNKEQEANQSNFRDPVSNADYEVQEKISLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRTFDDFSEDDAVYESE* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2721 452 SUPERFAMILY L30e-like 294 436 IPR029064 -
Ahy5g2721 452 TIGRFAM aRF1/eRF1: peptide chain release factor 1, archaeal and eukaryotic forms 28 433 IPR004403 GO:0003747|GO:0006415
Ahy5g2721 452 PANTHER EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1-3-LIKE 17 450 - -
Ahy5g2721 452 Pfam eRF1 domain 3 297 434 IPR005142 -
Ahy5g2721 452 Pfam eRF1 domain 1 34 154 IPR005140 -
Ahy5g2721 452 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 17 450 IPR004403 GO:0003747|GO:0006415
Ahy5g2721 452 SMART eRF1_1_2 20 156 IPR005140 -
Ahy5g2721 452 Pfam eRF1 domain 2 160 293 IPR005141 -
Ahy5g2721 452 SUPERFAMILY Translational machinery components 158 292 - -
Ahy5g2721 452 Gene3D eRF1 domain 2 152 293 IPR042226 -
Ahy5g2721 452 Gene3D eRF1 domain 1 13 151 IPR024049 -
Ahy5g2721 452 Gene3D - 295 452 IPR029064 -
Ahy5g2721 452 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 22 156 IPR024049 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2721 Ahy-Chr5 105245677 105249660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2721 17 450 Eukaryotic Initiation Factors Gene Family AT3G26618 89.631 0.0 809
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2721 K03265 - gmx:100785916 816.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2428 15 135619247 135623220 Ahy5g2721 5 105245677 105249660 hybridization