Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2710 ATGGTTCGGAAGAAGAGAACTGAAGCAGCTAGTTCTAGTGGGGGTGAAAGCTCTGAGGGCCAACAGCGCCCTGCAGAAAGGAGTGCTCCACCCCAACAGGCTGCTCCCACCAGTGGGCCTGGGCCACAAGGGGGAGGTAGGAGTTGGGGTCCCCAAGGAGGACGTGGTGGTTATGGAGGAGGACGTGGCCGTGGAATGCCTCAACAGCAGTATGGTGGCCCCCCTGAGTATCAAGGTAGGGGACGGGGAGGACCTCCCCAGCAAGGGTATGCTCCACGAGGTGGATATGGTGGTGGCCGCGGTGGTGGTGGTGGTGGTGTAGGAGGCGGTCGAGGCGTAGGACCTTCTTATGGTGGCCCACCACGGCCCCAAGTTCCCGAGCTGCACCAAGCTACCCCCCCAGTTCAGTATCAAGCGGCTGTGTCTCCTCGGCCTCCTCCCTCTGAGGCTAGTTCCAGTTCATCCCAGCCACAGGAGATGCCCCAACTGGAACAGCAAATGGGGCATATAACTCAGACAGAAGCTGCCCCTTCTGGTCCACCAGCTAGCAAGTCATCCATGAGGTTTCCCCTTCGCCCTGGGAAGGGTAGCTACGGCACAAAATGTATTGTCAAGGCCAACCATTTCTTTGCTGAGCTGCCAAACAAAGATCTGCATCAGTATGATGTAACGATCACTCCAGAAGTTACATCAAGAGGCGTTAACCGTGCTGTTATGGAGGAGTTGGTGAGGCTTTACCGAGAATCCCATTTGGGGAAGAGACTTCCTGCTTATGATGGGCGAAAGAGCCTCTATACAGCTGGTCCACTGCCTTTCGTGTCAAAGGAGTTTAGGATCATGTTAATTGATGAAGATGATGGAACTGGAGCTCAAAGGAGGGAGAGAGAATTCAAAGTTGTGATAAAATTGGCTGCTCGGGCAGACCTTCACCATTTAGGGCTCTTTTTGCAAGGGAGACAAACTGATGCACCTCAGGAAGCATTGCAGGTTCTCGATATTGTGTTGCGTGAACTTCCTACTACCAGGTATTCTCCTGTAGGAAGATCATTTTATTCACCCGATCTTGGAAGAAGACAGCCTTTGGGTGAGGGGTTAGAAAGCTGGCGTGGTTTCTATCAGAGTATTCGTCCCACACAGATGGGACTTTCTCTGAACATTGATATGTCTTCCACTGCATTTATTGAGCCATTGCCGGTGATTGAGTTTGTAACTCAGCTACTGAATAGGGATGTATCCACCCGACCACTGTCAGATGCTGATCGTGTGAAGATCAAAAAAGCTCTCCGTGGTATCAAGGTTGAAGTAACTCATCGTGGAAACATGAGAAGAAAATATCGCATCTCTGGTCTGACTTCCCAGGCTACTAGAGAGTTGACATTCCCTGTAGACGAGAGGGGAACAATGAAGTCTGTTGTCGAGTACTTCTCTGAGACCTACGGGTTTCACATTCAACATACTCAGTGGCCTTGTTTGCAAGTGGGAAATACACAGAGGCCAAATTATCTGCCAATGGAGGTTTGCAAGATTGTAGAAGGGCAGAGGTACTCAAAGAGGTTGAATGAAAGGCAGATTACTGCTTTGCTCAAAGTCACATGCCAACGACCTGTTGAAAGGGAGCGTGACATAATGCAGACAGTACATCACAATGCCTATGATCAAGACCCTTACGCTAAAGAGTTTGGAATCAAGATCAGTGAAAAGCTTGCTCAAGTTGAAGCTCGCATCCTTCCTCCACCCTGGCTCAAATATCATGATACAGGTAGAGAAAAGGACTGCCTACCTCAGGTTGGCCAGTGGAATATGATGAATAAGAAAATGGTTAATGGAGGAACAGTCAACCATTGGTTCTGCATTAACTTTTCCAGGAATGTTCAAGATAGTGTTGCCCGTACATTTTGTTACGAGCTCGCTCAGATGTGTCAAGTATCTGGCATGGCATTCAATCTGGATCCAGTAGTTCCCCCAGTTAGTGCTCGTCCTGACCAAGTTGAGAAGGTTCTGAAAACTCGGTATTATGATGCCAAGAACAAGCTGCCTGGAAAGGATCTTGATTTGCTTATTGTTATCCTGCCTGACAATAATGGTTCTCTTTATGGTGACCTGAAACGAATATGTGAGACTGATCTTGGGCTTGTTTCCCAATGTTGTTTAACAAAGCATGTATACAAAATGAGCAAGCAGTATCTTGCAAATGTTGCTTTGAAAATTAATGTTAAGGTTGGTGGAAGGAACACTGTGCTTGTTGACGCCCTTTCGCGGCGTATTCCCCTTGTTAGTGACAGGCCTACAATAATTTTTGGAGCCGATGTTACTCACCCACACCCTGGAGAGGATTCAAGCCCATCTATTGCAGCTGTTGTGGCTTCCCAAGATTGGCCTGAGATTACAAAGTATGCTGGTTTGGTTTGTGCACAAGCACATCGACAGGAACTCATTCAGGATCTCTTCAAGCAATGGCAAGATCCTAATAGAGGACAGGTCACGGGTGGAATGATTAAGGAACTACTCATATCTTTCCGGAGAGCAACTGGGCAGAAGCCACAGCGCATCATATTTTACAGGGATGGTGTGAGTGAGGGTCAATTTTATCAAGTCCTATTGTTTGAGCTTGATGCTATTAGAAAGGCCTGTGCATCTCTTGAGCCCAATTATCAGCCTCCTGTGACCTTTGTGGTAGTTCAAAAGCGTCATCACACTAGGCTTTTTGCCAGCAACCATCATGATCGAAACTCTATTGATCGGAGTGGGAATATACTGCCCGGTACTGTTGTGGACTCCAAAATCTGCCACCCAACTGAATTTGACTTTTATCTCTGTAGTCATGCTGGAATTCAGGGCACTAGTCGTCCAGCTCATTATCACGTTCTGTGGGATGAAAACAATTTCACAGCTGATGCTCTTCAGATGCTTACAAACAACCTGTGCTACACCTATGCCAGATGCACCCGTTCTGTTTCAATTGTGCCTCCTGCATACTATGCGCACTTGGCTGCATTCCGAGCCCGTTTTTACATGGAGCCCGAGACATCCGACAGTGGCTCGATGACAAGTGGTGCTGCTGCAGGTCGCGGTATGGGTGCAGGACGCAGTACGCGTGCACCTGGTGCCAGTGCTGCTGTGAGGCCCCTGCCATCCCTCAAGGACAATGTCAAGAGGGTCATGTTCTATTGCTGA 3174 0.4849 MVRKKRTEAASSSGGESSEGQQRPAERSAPPQQAAPTSGPGPQGGGRSWGPQGGRGGYGGGRGRGMPQQQYGGPPEYQGRGRGGPPQQGYAPRGGYGGGRGGGGGGVGGGRGVGPSYGGPPRPQVPELHQATPPVQYQAAVSPRPPPSEASSSSSQPQEMPQLEQQMGHITQTEAAPSGPPASKSSMRFPLRPGKGSYGTKCIVKANHFFAELPNKDLHQYDVTITPEVTSRGVNRAVMEELVRLYRESHLGKRLPAYDGRKSLYTAGPLPFVSKEFRIMLIDEDDGTGAQRREREFKVVIKLAARADLHHLGLFLQGRQTDAPQEALQVLDIVLRELPTTRYSPVGRSFYSPDLGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIEFVTQLLNRDVSTRPLSDADRVKIKKALRGIKVEVTHRGNMRRKYRISGLTSQATRELTFPVDERGTMKSVVEYFSETYGFHIQHTQWPCLQVGNTQRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPVERERDIMQTVHHNAYDQDPYAKEFGIKISEKLAQVEARILPPPWLKYHDTGREKDCLPQVGQWNMMNKKMVNGGTVNHWFCINFSRNVQDSVARTFCYELAQMCQVSGMAFNLDPVVPPVSARPDQVEKVLKTRYYDAKNKLPGKDLDLLIVILPDNNGSLYGDLKRICETDLGLVSQCCLTKHVYKMSKQYLANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDLFKQWQDPNRGQVTGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFASNHHDRNSIDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADALQMLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMTSGAAAGRGMGAGRSTRAPGASAAVRPLPSLKDNVKRVMFYC* 1058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2710 1057 MobiDBLite consensus disorder prediction 11 34 - -
Ahy5g2710 1057 SMART DUF1785_2 344 396 IPR014811 -
Ahy5g2710 1057 Gene3D paz domain 390 515 - -
Ahy5g2710 1057 Pfam PAZ domain 401 526 IPR003100 GO:0005515
Ahy5g2710 1057 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 91 1056 - -
Ahy5g2710 1057 PANTHER PROTEIN ARGONAUTE 1A 91 1056 - -
Ahy5g2710 1057 MobiDBLite consensus disorder prediction 1014 1039 - -
Ahy5g2710 1057 MobiDBLite consensus disorder prediction 145 180 - -
Ahy5g2710 1057 Pfam Mid domain of argonaute 594 669 IPR032473 -
Ahy5g2710 1057 Pfam N-terminal domain of argonaute 201 335 IPR032474 -
Ahy5g2710 1057 SMART PAZ_2_a_3 401 533 IPR003100 GO:0005515
Ahy5g2710 1057 CDD Piwi_ago-like 555 1005 IPR045246 -
Ahy5g2710 1057 SUPERFAMILY PAZ domain 203 548 IPR036085 GO:0005515
Ahy5g2710 1057 Pfam Glycine-rich region of argonaut 72 176 IPR024357 -
Ahy5g2710 1057 ProSiteProfiles PAZ domain profile. 397 511 IPR003100 GO:0005515
Ahy5g2710 1057 Pfam Argonaute linker 2 domain 537 583 IPR032472 -
Ahy5g2710 1057 Pfam Argonaute linker 1 domain 345 395 IPR014811 -
Ahy5g2710 1057 SUPERFAMILY Ribonuclease H-like 671 1006 IPR012337 -
Ahy5g2710 1057 SMART Piwi_a_2 685 1006 IPR003165 GO:0003676
Ahy5g2710 1057 ProSiteProfiles Piwi domain profile. 685 1006 IPR003165 GO:0003676
Ahy5g2710 1057 Gene3D - 754 1057 IPR036397 GO:0003676
Ahy5g2710 1057 Pfam Piwi domain 686 1005 IPR003165 GO:0003676
Ahy5g2710 1057 MobiDBLite consensus disorder prediction 1 192 - -
Ahy5g2710 1057 Gene3D - 575 748 - -
Ahy5g2710 1057 CDD PAZ_argonaute_like 396 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2710 Ahy-Chr5 105005357 105012487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2710 76 1057 Eukaryotic Initiation Factors Gene Family AT1G48410 80.948 0.0 1617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2710 K11593 - gmx:100780375 1721.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2439 15 136118667 136125828 Ahy5g2710 5 105005357 105012487 hybridization