Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2709 ATGTCACCAGTTGGATTACCACCTGGGTTTAGGTTTCATCCAACAGATGAAGAGCTTGTTAACTATTATCTAAAGAGGAAGATCAATGGCCAAGAAATTGAACTTGATATCATTCCTGAGGTTGATCTCTACAAATGTGAACCATGGGAATTAGCAGAAAAATCATTTTTGCCGAGTAGAGATCCAGAGTGGTATTTCTTTGGACCAAGGGACAGAAAATACCCTAACGGATTCAGAACAAATAGAGCAACACGAGCAGGGTACTGGAAATCAACAGGTAAAGACAGGAGAGTTTCAAGCCAAAGCAGACCAATTGGTATGAAGAAGACTTTGGTTTATTATAGAGGAAGGGCTCCTCAGGGAATCAGAACTGATTGGGTTATGCACGAATATCGTCTCGATGACAAGGACTCTGAAGACACCACCGGTTTACAGGATACTTATGCTTTGTGCCGTGTGTTCAAGAAAAATGGAATATGTACGGATGTTGAAGAGCAAGTAGGGCATTGTAGTAACATGTCTTCACTAATTGAGAGCTCACAAACCATAATCAATAATAATAACAATAATAGTAATAATAATAATGAGTATTGTGAAACCATGTCACCAGACATAGCAGGGGTTTCATCTTCATGTTTGGAAGAGGAAGACAAAGATGATTCATGGATGCAGTTCATCACAGAAGATGCATGGTACTCTTCTAATGCACCAAATATGGTTGGTGGTGAAGAAGTTTCACATGTTACATTTACAAGCTAA 759 0.3913 MSPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVSSQSRPIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKDSEDTTGLQDTYALCRVFKKNGICTDVEEQVGHCSNMSSLIESSQTIINNNNNNSNNNNEYCETMSPDIAGVSSSCLEEEDKDDSWMQFITEDAWYSSNAPNMVGGEEVSHVTFTS* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2709 252 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
Ahy5g2709 252 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Ahy5g2709 252 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 251 - -
Ahy5g2709 252 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Ahy5g2709 252 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 251 - -
Ahy5g2709 252 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2709 Ahy-Chr5 104880779 104885808 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2709 1 245 NAC Transcription Factor Family AT3G17730 76.984 1.79e-133 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy5g2709 NAM 6.60E-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2709 - - adu:107490712 518.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2441 15 136448781 136454455 Ahy5g2709 5 104880779 104885808 hybridization