Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2706 ATGGAGATGCAGGACCAAATCGAAGGCACAAAGCTAAGCAAGTCTGGTACAGCCAGTGACTGCCATTCCAATGATGGATCACAATCCCAATCGCCAGATATAAGTTCTGTTGTGAACAATCATGCCCCCAAGGTGAGGAAACCATATACCATCACTAAGCAAAGGGAGAAGTGGACTGAGGAAGAGCATGAAAAGTTCCTTGAAGCTTTGAAGTTGTATGGTCGGGGATGGCGTCAAATTGAAGAGCATATAGGCACCAAAACTGCTGTTCAGATTCGAAGCCATGCACAAAAGTTTTTCTCTAAGGTTGTGCGGGACTCGGACGGAAGTGCTGAAAGTTCTATACATCCAATTGACATACCTCCTCCTCGTCCTAAAAGGAAACCCCTTCATCCATATCCCCGTAAATTGGCCAACTCCTTCAAAAGGCACTCCATACCAAATGAACCAGAAAAATCTCCATCGCCTAATCTGTCCTCTGCGGAGAAAGACTCTCAATCTCCAACCTCTGTGCTATCTGCCTTTGGTTCGGAAGCATTTGGGTCAGCATTTTCAGAGCAGACCAACAGATGCCTTTCTCCGAATTCTTGCACTACTGACATTCAATCAATCAACTTGTCACCTATTGAGAAGGAAAATGATTGCATGACATCTAAACCATCCAAGGAGGAAGACAAAACGCCTCTAGCTTCTGCCCCTTTATCCATCAGCTCACAACCTTACTTGCACATGAAGTCTGAGAAGTTGGAGTTGTGTTCCAAGCAAACCAAGTGTATCAACAATGATGTTGTCAATGTCCTGCCCACTACTATAAAGCTGTTTGGAAGAACTGTTTCAATGGTCGGTAATCAGGAGTCAATTAATACTGAAGAGGAGTGTGTTAAGCTATGTATTACTAGGTCTGATGAAGTAGATGATGTTGAGAATCAATTGAATACACAGTTATCACTAGGCATGTGTAATGGAAGTTGGCAAGTAATGCCTAAAGAAGCTATAGTGAAGGAGGACCTTGGCCTTGGAGAATCTGCACCTGAAGCATCTTTGTCATGGTCAAGTTTGTTCCCAGGCGGTCTGGCTGCTTACTTTGGTTCATCCAATACAGTCGTAAATCCTATGCCTCTTCACCCCTCCTTGAAAGTAAGAACTAGAGAGGAGGAAGGTTCTTGTACTGGTTCCAATGGTGAATCAGTCAATGATGTGGAAATTCAGGGCAAGATTCAGGGAAGGTTCTTGGACACCGTCGATTCCAGGTGTCAACAAACATCTCATCAAGAGGAAGTAGTAGTCCCCCAGAAGTCTCCAAGGGGTTTTGTACCATACAAAAGATGTTTAGCTGAAAGAGATGCAAGTTCTTTGATTGTTGCATTGGAAGAAAGGAAGGGGCAAAGAGCTAGGGTGTGCTCATAG 1407 0.4407 MEMQDQIEGTKLSKSGTASDCHSNDGSQSQSPDISSVVNNHAPKVRKPYTITKQREKWTEEEHEKFLEALKLYGRGWRQIEEHIGTKTAVQIRSHAQKFFSKVVRDSDGSAESSIHPIDIPPPRPKRKPLHPYPRKLANSFKRHSIPNEPEKSPSPNLSSAEKDSQSPTSVLSAFGSEAFGSAFSEQTNRCLSPNSCTTDIQSINLSPIEKENDCMTSKPSKEEDKTPLASAPLSISSQPYLHMKSEKLELCSKQTKCINNDVVNVLPTTIKLFGRTVSMVGNQESINTEEECVKLCITRSDEVDDVENQLNTQLSLGMCNGSWQVMPKEAIVKEDLGLGESAPEASLSWSSLFPGGLAAYFGSSNTVVNPMPLHPSLKVRTREEEGSCTGSNGESVNDVEIQGKIQGRFLDTVDSRCQQTSHQEEVVVPQKSPRGFVPYKRCLAERDASSLIVALEERKGQRARVCS* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2706 468 CDD SANT 57 100 IPR001005 -
Ahy5g2706 468 Pfam Myb-like DNA-binding domain 55 98 IPR001005 -
Ahy5g2706 468 ProSiteProfiles SANT domain profile. 53 104 IPR017884 -
Ahy5g2706 468 PANTHER SWI/SNF COMPLEX-RELATED 3 456 - -
Ahy5g2706 468 MobiDBLite consensus disorder prediction 150 170 - -
Ahy5g2706 468 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 53 102 IPR006447 GO:0003677
Ahy5g2706 468 MobiDBLite consensus disorder prediction 1 60 - -
Ahy5g2706 468 SUPERFAMILY Homeodomain-like 49 102 IPR009057 -
Ahy5g2706 468 MobiDBLite consensus disorder prediction 208 235 - -
Ahy5g2706 468 Gene3D - 57 104 - -
Ahy5g2706 468 ProSiteProfiles Myb-like domain profile. 50 100 IPR001005 -
Ahy5g2706 468 PANTHER PROTEIN REVEILLE 7-RELATED 3 456 - -
Ahy5g2706 468 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 50 104 IPR017930 -
Ahy5g2706 468 MobiDBLite consensus disorder prediction 105 170 - -
Ahy5g2706 468 MobiDBLite consensus disorder prediction 8 38 - -
Ahy5g2706 468 SMART sant 54 102 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2706 Ahy-Chr5 104842110 104846200 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy5g2706 Myb_DNA-binding 1.50E-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2706 - - gmx:778089 537.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2444 15 136489140 136493242 Ahy5g2706 5 104842110 104846200 hybridization