Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2705 ATGGCATTTGTGATAGACTTGAACACGCAGCCATCGTTAGAAGAAATTCACTCATTTGATACCTATATTAATATGGACGATACAAATATTTGTAATAGTTCAAGCAATGATATGGACGATACAAATATTTGTAATAGTTCAAGCAATTCTGCTACAGAAACTGAGTGCACGACTGAGGTCATAATTCATCCCACCATTTCTGATGAGGAGATTCCAAAAGTGGGGATGCTATTTGGAACCCTCGAAGAAGCACGCCAATTTTACTACAACTATGCCAATAAAGTGGGATTCGAGCCTCATATAAGAAACACTAACTTCGACAAGAATGGAAGGACACCCATTAACCAATCCATACAGTGCAATAGAGATGGATACCGAACAAAGAAGAATCTGGTAACCCAAAGGTCAAACACAGTCTCATCTGTACACTGTAAAGCTCGCATCTATGTGAAACTTGACAAAGAGCTTGGAAAATGGAGACTGTCGAAAATAGAATTGGCTCACACGCATCGGTGTGATCCCAGTTTGTCATGGATGTTCAAAAAAAATAGAGAACTCTCCATGCACGTTAAGGATGTCATTGAGCGCAACGACCAGGCTGGTATACGACCTTCGAAGACTTTTCAGGCGCTTGCTGATGAAGCTGGTGGTCGTTCTAATCTGAAATTTCTTGAGAAGGATGTTAGAAATTATATATCTGGTAAACTCCGAATCAATGGAGATAATACTGATGCGCAAGAGATGCTGGACTATTTTACCAGGATGAAAGAGCAGAACCCGAATTTCTTTTACGACATTTGTGTCTATAGTGATAATAGTCTCAAGCATGCATTTTGGGCGGATGCTCGATCAAGAGCTGCTTACGAGTATTTTGGTGACGTGGTGTCATTTGACACCACATACAAGCTCAACAAGTATGAGATGCCAGTTGCAGCATTTGTTGGTGTCAATCACCATGGAAGGTCATGTCTTTTCGGGTGTGCTTTATTGGGCAATGAAGAGACTGAGTCTTTTGAATGGCTCATGCAAACATTTATAAAATGTATGGGAAAAACACCAGATGGAATCTTAACTGACCAATGCGGGGCCATGGCAACAGCCATTCGAAATGTCATGCCAAACACCACGCATAGATTGTGCATTTGGCACATCACGAGGAAGATACCCCATAAACTTGGAAAGTTGAGCCGATATGAAGAAATTAAAGCCACAATGCGTGGAATTATTTGGGAGTCTCATTCGCAAGAATCATTTGAAAGTTCTTGGTATGACTTCATTGAAGAGTACACCCTTCATGACAACAACTGGCTTACTGATATCTATAATATTCGCAATATATGGGTCCCTGTTTTTCTAGAGCACAAATTTTGGGCTGATAAGGAACAGCAGGAGTTGGAATGCGATGTAGCAGATAATAGGGGCCTGATCCCATGTGCCTCGAACTCACCGATTGAGAAGCAGTTCCAATATGAGTACACGAACTGCATATTTCGCGATGTTCAAGCCGAATTTGTCAAAAAGTGCGACTGCAACCTGTCTCCAAGGGTAGTGAAGGACAACCAATACTTCTATGAAGTGACTCAACAGAAGATAGTTAAAGGGATGTCTATTTACAGCGAGTATGAGGTTGTGTTTTGTCCTATCTCGCACCAGGGTTGA 1659 0.4135 MAFVIDLNTQPSLEEIHSFDTYINMDDTNICNSSSNDMDDTNICNSSSNSATETECTTEVIIHPTISDEEIPKVGMLFGTLEEARQFYYNYANKVGFEPHIRNTNFDKNGRTPINQSIQCNRDGYRTKKNLVTQRSNTVSSVHCKARIYVKLDKELGKWRLSKIELAHTHRCDPSLSWMFKKNRELSMHVKDVIERNDQAGIRPSKTFQALADEAGGRSNLKFLEKDVRNYISGKLRINGDNTDAQEMLDYFTRMKEQNPNFFYDICVYSDNSLKHAFWADARSRAAYEYFGDVVSFDTTYKLNKYEMPVAAFVGVNHHGRSCLFGCALLGNEETESFEWLMQTFIKCMGKTPDGILTDQCGAMATAIRNVMPNTTHRLCIWHITRKIPHKLGKLSRYEEIKATMRGIIWESHSQESFESSWYDFIEEYTLHDNNWLTDIYNIRNIWVPVFLEHKFWADKEQQELECDVADNRGLIPCASNSPIEKQFQYEYTNCIFRDVQAEFVKKCDCNLSPRVVKDNQYFYEVTQQKIVKGMSIYSEYEVVFCPISHQG* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2705 552 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 50 462 IPR031052 GO:0006355
Ahy5g2705 552 Pfam MULE transposase domain 294 386 IPR018289 -
Ahy5g2705 552 Pfam FAR1 DNA-binding domain 86 173 IPR004330 -
Ahy5g2705 552 PANTHER OS03G0843700 PROTEIN 50 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2705 Ahy-Chr5 104744705 104747028 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy5g2705 MULE 4.30E-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2705 - - ahf:112803761 1078.93