Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2700 ATGGGAAGAGGCAGAGGAGTTGCGACTCTGAAACCCACGGCGGCGGTTGCGGCAGCGGAGATAAATGGATCAGGGCCAATGCCAGTATTGAAGGAAGTTAGATACCGCAGTGCGAGAAAGAGACCGTGGGGAAGATTCGCCGCCGAAATCAAAGACCTGTTGAAGAAAGCAAGGATTTGGCTCGGAACCTTCGATTCCGCCGAGGACGCCGCATGCGCTTACGACGCCGCCGCAAGAACACTCCGGGGACCAAAAGCCAAGACCAATTTTCCTCACCGCTCAGGATCCAGCTCTCAATGTAGAACTGCAGCTTCGCCAGCACCACTTGCTGCGATGGGAGATTCAACCCTTCCGCTGCTGCTCCGCCGCCCTGGATGGCAACTTCCTTCTCGGCCAGAGCCGTTTCCTCCATATGCAATTTTTTGTAAGTTGCTGATTCTTCATAAATTGCACAATTTGGACTGGTTGAATTGTAAACTGAGCCTATAA 489 0.5297 MGRGRGVATLKPTAAVAAAEINGSGPMPVLKEVRYRSARKRPWGRFAAEIKDLLKKARIWLGTFDSAEDAACAYDAAARTLRGPKAKTNFPHRSGSSSQCRTAASPAPLAAMGDSTLPLLLRRPGWQLPSRPEPFPPYAIFCKLLILHKLHNLDWLNCKLSL* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2700 162 PRINTS Ethylene responsive element binding protein signature 57 73 IPR001471 GO:0003700|GO:0006355
Ahy5g2700 162 PRINTS Ethylene responsive element binding protein signature 35 46 IPR001471 GO:0003700|GO:0006355
Ahy5g2700 162 CDD AP2 34 92 IPR001471 GO:0003700|GO:0006355
Ahy5g2700 162 SUPERFAMILY DNA-binding domain 35 92 IPR016177 GO:0003677
Ahy5g2700 162 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 2 101 - -
Ahy5g2700 162 SMART rav1_2 34 97 IPR001471 GO:0003700|GO:0006355
Ahy5g2700 162 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3-RELATED 2 101 - -
Ahy5g2700 162 Pfam AP2 domain 34 83 IPR001471 GO:0003700|GO:0006355
Ahy5g2700 162 ProSiteProfiles AP2/ERF domain profile. 34 91 IPR001471 GO:0003700|GO:0006355
Ahy5g2700 162 Gene3D AP2/ERF domain 33 93 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2700 Ahy-Chr5 104500354 104500842 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2700 1 91 AP2-EREBP Transcription Factor Family AT1G50640 67.033 8.07e-33 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Ahy5g2700 AP2 2.90E-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2700 K09286 - ming:122069650 115.931