Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2691 ATGGTGATCACCTCCGCTGTCACAGATCCTGAAGAACAAACACAAAGCTTGCACTCTACTTTTGCTTCCAGATATGTTCGTGACCCTATTCCCAGGTTCAAGATGCCAGAGAAGTGTATACCAAAGGATGCAGCATATCAGATCATAAACGATGAGTTGATGTTGGATGGAACACCAAGGCTTAACTTGGCATCTTTTGTGACCACTTGGATGGAGCCTGAGTGTGATAAGCTCATCATGGCTTCGCTTAACAAGAACTATGTTGACATGGATGAGTATCCTGTCACCACTGAGCTCCAGAATAGGTGCGTTAATATGATAGCACACCTATACCATGCTCCTATCGGTGATGATGAGGCTGCAGTCGGTGTCGGAACTGTCGGATCATCAGAGGCAATAATGTTGGCAGGTCTAGCTTTTAAAAGGAAATGGCAGGCAAAGAGAAAAGCAGAAGGCAAACCTTATGATAAGCCTAACATAGTTACCGGCGCTAATGTGCAGGTTTGTTGGGAGAAGTTTGCACGGTATTTCGAGGTTGAGCTTAAGGAAGTGAAACTCACAGAAGGATACTATGTGATGGACCCTGTGAAAGCAGTTGAAATGGTTGATGAGAACACCATCTGTGTGGCGGCGATTTTGGGGTCGACTCTGACCGGTGAGTTTGAGGATGTGAAACTTCTTAATGAGCTTCTTACTAAAAAGAATAAGGAGACAGGATGGAATACCCCGATTCATGTTGATGCTGCCAGCGGAGGGTTCATTGCCCCATTTCTCTACCCTTGTCTTGAGTGGGATTTTCGCTTACCATTAGTGAAGAGCATCAATGTTAGTGGTCATAAGTATGGTCTTGTCTACCCCGGTGTCGGTTGGGTTGTTTGGAGGAGTAAAGATGACTTGCCAGAGGAACTTGTTTTTCACATAAACTATCTCGGATCGGATCAGCCAACATTTACCCTCAATTTCTCCAAAGGCTCTAGTCAAATTATTGCTCAATATTACCAATTTATACGGCTTGGCACAGAGGGCTACAAAAATATCATGGAGAACTGCAGGGAGAATGCAAGAATTCTGAGGGAGGGAATCGAGAGAACAGGCCGGTTCAACATCATCTCCAAGGATGTTGGCGTGCCGCTTGTTGCCTTCTCTTTGAAAGACAGCAGCCAACACACAGTGTTTGAGGTGTCAGACCATCTGAGAAAATTTGGCTGGATAGTTCCGGCCTACACAATGCCGCCAGACGCGCAGCACATTGCAGTCCTCCGGGTGGTGATCAGGGAGGATTTCAGCCGGGGATTGGCGGAGAGACTCGTGTCCGACATAGTGAAAGTTGTGGATCTCGTGGACACACTTCCAAGCCCTCTATCAACAAAAAAGGCACATGTGGTAGCTGTTGCTAATAATGAGACAAGTGAGAAGGCTAAGAAGAGTGCATTAGAGACTCAGAAAGAGATTGCCTTGTATTGGAAGAGGCTTGTGGATGGTAAAAGAGTTGGAGCATGTTAG 1503 0.4597 MVITSAVTDPEEQTQSLHSTFASRYVRDPIPRFKMPEKCIPKDAAYQIINDELMLDGTPRLNLASFVTTWMEPECDKLIMASLNKNYVDMDEYPVTTELQNRCVNMIAHLYHAPIGDDEAAVGVGTVGSSEAIMLAGLAFKRKWQAKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLTEGYYVMDPVKAVEMVDENTICVAAILGSTLTGEFEDVKLLNELLTKKNKETGWNTPIHVDAASGGFIAPFLYPCLEWDFRLPLVKSINVSGHKYGLVYPGVGWVVWRSKDDLPEELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGTEGYKNIMENCRENARILREGIERTGRFNIISKDVGVPLVAFSLKDSSQHTVFEVSDHLRKFGWIVPAYTMPPDAQHIAVLRVVIREDFSRGLAERLVSDIVKVVDLVDTLPSPLSTKKAHVVAVANNETSEKAKKSALETQKEIALYWKRLVDGKRVGAC* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2691 500 Gene3D - 69 363 IPR015421 GO:0003824
Ahy5g2691 500 PANTHER GLUTAMATE DECARBOXYLASE 3 500 - -
Ahy5g2691 500 SUPERFAMILY PLP-dependent transferases 14 445 IPR015424 -
Ahy5g2691 500 Gene3D - 364 451 - -
Ahy5g2691 500 Pfam Pyridoxal-dependent decarboxylase conserved domain 36 384 IPR002129 GO:0016830|GO:0019752|GO:0030170
Ahy5g2691 500 Gene3D - 1 68 - -
Ahy5g2691 500 PANTHER GLUTAMATE DECARBOXYLASE 3 500 IPR010107 GO:0004351|GO:0006536|GO:0030170
Ahy5g2691 500 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 19 445 IPR010107 GO:0004351|GO:0006536|GO:0030170
Ahy5g2691 500 CDD DOPA_deC_like 62 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2691 Ahy-Chr5 104249978 104253981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2691 12 500 Calmodulin-binding Proteins AT3G17760 79.550 0.0 819
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2691 K01580 - gmx:100783047 910.983