Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2689 ATGAGTGCTTCGACGAGGAAGAAGGTGCAGAGGAAGTGCAAGATCAGAGGGCGCGTCCTCAAAGTCGAAGCTCTTGACGAGATCCTCTCCTTCGTCTCTCGATTCGAAGGCTCCGATGAGGACGAAGCCATCGATCTCCTCCTCGACGAACTCGAACTCGAACTCGAATCTCAGAAATCCACTATAATCGAGAAAGAGCCGGTGCACCGTGTGGTGAGCCGGCTGTTGGAAGCTGATGCGGCTGTCGAGGAGAGCTCCGATCCATGCTCTGCCGGCGGTTCTGCCATTCGCGTCGTCGATGCGTTCCTGGTCCCCAAGTTCAGATACGACCCTATTAGAAAGCAGTTCTACGAGCACACAGGCAGCTTGCCTATTCATGGTGACGCATCAGCAAAAGCGGCCTTGTATAGGGATAGGTTTTTGTTGTTGTTCCAGAGGCTCTCTCGAGATCAGAATTTTTCGAAACCTGCTTTTGAATCAGAATTTTCACATTTTGGGAGCTGTGAGATATCTCCTATCCAATCTCTGGTTGGACAAACGGGTAGAAAATGGGTAATGGGAGTAATATCTCAGCTGGAGGATGGACATTTTTATTTAGAAGATCTTACCGCTTCAGTTGAAATTAATTTGTCTAATGCTAAGATAACTACAGGATTCTTTTCTGAGAACACCATAGTTGTTGCTGAAGGCGAGATGCTGGCATCGGGAATATTTCAGGTGTTAACGTGTGGATTTCCCCCACTGGAGGATAGGGATAAGTCACTTAGACAAATTGCAGGGCATGATTTTTTCGGTAGTGGTACTTTAACGAAAGAGGAAACTATCAGACTGGCAGACATGGAGAAAAAAGCAGTCAATGATATGTTTGTTATTCTGTCTGATATTTGGCTAGACAATGAAGAGGCTATGGGAAAGCTGGAGACTGTGCTTGATGGTTTTGAGAGTGTGGAAGTTGTTCCTTCCTTATTTGTCTTCATGGGGAACTTCTCTTCTCATCCATGTAACCTTGCGTTTCATGCTTATTCAACCCTCAGGTCACAGTTTGGAAAGCTAGGGCAACTAATTGCTGCCCATCCACGGCTAACAGAGCACAGTAAATTCCTGTTTATTCCAGGTCCTGATGATGCAGGCCCTTCAACAGTTCTGCCTAGGCGTGCTCTACCGAAATATTTGACAGAGGAGCTCCAAAATCACATACCAAATGCCATATTCTCAAGCAATCCCTGCAGGGTCAAGTTCTATACTCAAGAAATTGTATTTTTCCGCCAGGATATGCTGTATAGAATGCGTCGATCATGTTTAATGCCACCTTCTATGGAAGAAACTGATGATCCTTTTCAGCATCTTGTGGCTACCATGACCCATCAGTCTCATCTCTGTCCACTCCCTCTAACTGTACAACCAATCATCTGGAACTATGACCACTGCCTTTATCTTTATCCAACTCCGCACACGATTGTCTTGGGAGACAGAAGTCAGCAGAAGGCATTCAAGTACACAGGAATCACTTGTTTCAACACTGGTTCCTTCTCAATTGACAGCACTTTCGTGGCATACCGGCCTTGCTCTCAGGAAGTTGAATTGTCAGCCTTGTAA 1596 0.458 MSASTRKKVQRKCKIRGRVLKVEALDEILSFVSRFEGSDEDEAIDLLLDELELELESQKSTIIEKEPVHRVVSRLLEADAAVEESSDPCSAGGSAIRVVDAFLVPKFRYDPIRKQFYEHTGSLPIHGDASAKAALYRDRFLLLFQRLSRDQNFSKPAFESEFSHFGSCEISPIQSLVGQTGRKWVMGVISQLEDGHFYLEDLTASVEINLSNAKITTGFFSENTIVVAEGEMLASGIFQVLTCGFPPLEDRDKSLRQIAGHDFFGSGTLTKEETIRLADMEKKAVNDMFVILSDIWLDNEEAMGKLETVLDGFESVEVVPSLFVFMGNFSSHPCNLAFHAYSTLRSQFGKLGQLIAAHPRLTEHSKFLFIPGPDDAGPSTVLPRRALPKYLTEELQNHIPNAIFSSNPCRVKFYTQEIVFFRQDMLYRMRRSCLMPPSMEETDDPFQHLVATMTHQSHLCPLPLTVQPIIWNYDHCLYLYPTPHTIVLGDRSQQKAFKYTGITCFNTGSFSIDSTFVAYRPCSQEVELSAL* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2689 531 Pfam DNA polymerase alpha/epsilon subunit B 289 494 IPR007185 GO:0003677|GO:0006260
Ahy5g2689 531 Gene3D - 2 74 - -
Ahy5g2689 531 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 6 530 IPR016266 GO:0003677|GO:0006261|GO:0008622
Ahy5g2689 531 PIRSF DNA_pol_epsilon_2 1 531 IPR016266 GO:0003677|GO:0006261|GO:0008622
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2689 Ahy-Chr5 104230396 104234549 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2689 16 488 Core DNA Replication Machinery Family AT5G22110 70.825 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2689 K02325 - qsu:112038614 887.486
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2467 15 137370039 137374194 Ahy5g2689 5 104230396 104234549 hybridization