Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2673 ATGGCAACACTGCCGACCTTCTCCATCCAACCATCCTACCCGTCGCTCCCTGCTCAGCTCTTCGCCGTGCGTGTCGCCGTTAGCAGTGCCGTTCGTGAGCGTGGTGCAAGTGTTGTTCACGGTTGCGATGCATCCTTGCACTCATCAACTCATCAATTGCCCCCATCTTCTCCATCAAATCATCCATCCCGTCGCTGCCTCCTCGCTTCTCCGCAGTGGGTGCCTCCATTAGCTATGACGTTCGTGAGCGTGGTGCAAGTGGTGTTCACGGTTGCGGTGCATTTTTTTTACTCATCAACTCATCAATTGCCCCCACCTTCTCCATCAAATCATCCAACCCGTCATTGCATTCTCGCTTCTCCGCGGTGCATTCCGCCATTAGCGGTGACATTTGTGAGCGTGGGATCTAAGCGTCCTTGCTTGATGGTCGACAAAATTATCGATGTCATTGTGATGGAAAAGGATGAGTTAGAATTGAGACATGAGTTGCCGGATCATAGTGGGATCAGTGAAGAGGAAATCCTAGTCATAGGAATGTGTTTTGATTCGTTACCTCAGGCACAAAAATTTTATGCAAATTATGCAAAGAAAGCTTGGTTCGTAACTAAAGTCAAGAACACAAATTTTGATAAGACAAGGAAGGAATCAAAGATACCTATTAATCATTCTACTCACTACACCCGAGAAGGTTATTGGAAGGTGGAGGCAGCAACTCAGACAAACAGAATAACAGTCACGAGATGCAGAAAAAGGATATATGTCATGTTGGACAGGGAGAAGGAAAGTTGGATTGTGTCTAGATTAGAATTGAGGTATTTCCACCCCTGTTCGGCTAACAAATCGGTCGACTATCACAAGTATAGGGAGTTGACCACACATGCTAAGTGTGTCATTACGGATAACAACGAAGCTGGCATAAGACCCAACAACACGTACCTAGCACTGGCTAATGAGGTTGGTGGATTTTCAAACTTGAATTTTTCAGAAAAAGATGTCAGAAATTACATCACAAGTAAACTTCGCTGTGTTGACAAGAATGCAGACTTTAAGGAGATGATGAATTATTTCATGCGAATGAAAGATATCAATCCCAACTTCTTTTATGTCATAGATGCTGACGATGCTAATAAGTTCAAGAGCACACTTTGGGTAGATGCAAGACATGGTCTACTGTTTGCATCCTTTATTGGTGTCAACCACCATGGAAAGTCTACTCATTTTGGTTGTGCATTACTTGGTAGCGAAGAGATCCCTAGTTTTGAGTGGGTGTTCACATGGTGCATCTGGCACATACTGAAGAAGTCACAATCAAAGCTTGGGGGTTATGCTAGGTACAGAGAATTGAATGCTAAGATGAGCCACACTGTGAAGAATTCTCCTTCTGTTGATTCTTTTGATGTTGATTGGTCTGGATTCATCAAAGAATTCGACCTAGGTCAGAAAAGATGGTTATCAGATCTTTATGCCAATCGACAAAAGTGGATTCCAATATTATTCAAGGATGAATTTTGGCCAGTATAA 1521 0.4339 MATLPTFSIQPSYPSLPAQLFAVRVAVSSAVRERGASVVHGCDASLHSSTHQLPPSSPSNHPSRRCLLASPQWVPPLAMTFVSVVQVVFTVAVHFFYSSTHQLPPPSPSNHPTRHCILASPRCIPPLAVTFVSVGSKRPCLMVDKIIDVIVMEKDELELRHELPDHSGISEEEILVIGMCFDSLPQAQKFYANYAKKAWFVTKVKNTNFDKTRKESKIPINHSTHYTREGYWKVEAATQTNRITVTRCRKRIYVMLDREKESWIVSRLELRYFHPCSANKSVDYHKYRELTTHAKCVITDNNEAGIRPNNTYLALANEVGGFSNLNFSEKDVRNYITSKLRCVDKNADFKEMMNYFMRMKDINPNFFYVIDADDANKFKSTLWVDARHGLLFASFIGVNHHGKSTHFGCALLGSEEIPSFEWVFTWCIWHILKKSQSKLGGYARYRELNAKMSHTVKNSPSVDSFDVDWSGFIKEFDLGQKRWLSDLYANRQKWIPILFKDEFWPV* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2673 506 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 392 425 IPR031052 GO:0006355
Ahy5g2673 506 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 176 387 - -
Ahy5g2673 506 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 392 425 - -
Ahy5g2673 506 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 426 504 - -
Ahy5g2673 506 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 176 387 IPR031052 GO:0006355
Ahy5g2673 506 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 426 504 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2673 Ahy-Chr5 103904789 103916995 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy5g2673 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2673 - - ahf:112803920 1027.31