Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2671 ATGGATGGGGATAATGGTCTTAACATACGTAATTGGGGTTACTATGAACCTGCTACCTCTTTCAAGAGCCATCTGGGGCTCCAGCTAATGTCATCGATGCCGGAAAAGCCTCTTCTCGGAGGACGCAATGCTGCAGTTTTGTCCGGCACTAATGGTGCCTATCACCATAGGGACATTGGGATGCCCCCGGCTACTTACCCTATGGATTACATGAGGGATGCTTGGATTAGTAGTCAGAGAGAGAAGTATATGAATATGATACCTACAAACCCAAGTTATGGTAGTATTCCGGAGACGTCTTCCACGCATCACATGCAAATGATTCCACCGCCTGAGTTGTCCGCAAAGGAAGAAAGGCCCGTGGAAGAAGCGCCTGTTGTTGAGAAAGCGAACACCACTGGAAAGAAGAGACAGGGTCCCAAGGTTCCGAAATCTCCCAAGGCAAAGAAGCCCAAGAGGGGGCCTCGCGTTCCTAAGGATGAGAATGCTCCTACAGTTCAACGAGCTAGGGCTCCAAAGAAAACTACTGAGATTGTGATAAATGGGATTGACTTGGATATTTCGAGTATTCCAATCCCTGTTTGTTCGTGCACTGGGACACCCCAACAGTGTTACCGATGGGGCTCGGGTGGGTGGCAGTCTACATGTTGCACAACGGGAATGTCTACATATCCTTTGCCTATGAGTACAAAGCGGCGTGGTGCTAGGATAGCTGGAAGGAAAATGAGTATAGGAGCATTTAAGAAAGTTTTAGAGAAACTTGCAGCTGAGGGTTATAACTTTTCTAATCCAATTGATTTGAGGACTTACTGGGCAAAACATGGTACCAATAAGTTTGTCACTATCAGGTAG 852 0.4707 MDGDNGLNIRNWGYYEPATSFKSHLGLQLMSSMPEKPLLGGRNAAVLSGTNGAYHHRDIGMPPATYPMDYMRDAWISSQREKYMNMIPTNPSYGSIPETSSTHHMQMIPPPELSAKEERPVEEAPVVEKANTTGKKRQGPKVPKSPKAKKPKRGPRVPKDENAPTVQRARAPKKTTEIVINGIDLDISSIPIPVCSCTGTPQQCYRWGSGGWQSTCCTTGMSTYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLRTYWAKHGTNKFVTIR* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2671 283 PANTHER - 1 283 IPR010409 -
Ahy5g2671 283 Pfam GAGA binding protein-like family 1 283 IPR010409 -
Ahy5g2671 283 MobiDBLite consensus disorder prediction 113 173 - -
Ahy5g2671 283 SMART GAGA_bind_2 1 283 IPR010409 -
Ahy5g2671 283 PANTHER PROTEIN BASIC PENTACYSTEINE2-LIKE 1 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2671 Ahy-Chr5 103793288 103795079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2671 1 283 BBR or BPC Transcription factor family AT2G01930 52.843 1.40e-97 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Ahy5g2671 GAGA_bind 2.50E-110 No_clan