Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2662 ATGGGTGAGAATGTGATTCCTGATCTATCACTGCAGATAAGCCTGCCAAAGAGTGCTCCACCATCAATATGCAATAATGAAGAAGAAGGAGATTGTGGAGGGTTTGATATATGGAGAAGTAGCACTACTACTAGTGATGGTGCTGAAAAATCACACAGTGATGGTTCCATTTCAATCCCTACTACTCTTCTTCATCATCATAAGAACATGGAGACACAACTCTCTTTAGCAGCACCTACAACCCCAACCCCTTCTGAAGCTGAAAGCCCTTGGAACAAATCATCATCATCATCAGAGCAAGTAGTAATTAGGCCTATCAATGGAATCCCTCTTTACAACAACAACAACACTCCTTCTTCGCCACTTTCAAGGTTTAATAATGCTATAACTATGGAGAGTCTAAGAACCCTTAATCACCATCACTTATTTGGGGTTATTGGGGGTGCTAACAACAACACTGACTTCACAAACGGGTTTGTGATGAGGTCTAGAATGTTCCCATCATCAACAACAACAACAACAAGGATGATGATTCATAGCAGCAAGAGGAACATGAGGGCTCCAAGAATGCGCTGGACTACCTCCCTCCATGCCCGATTTGTTCACGCTGTTCAACTCCTTGGCGGCCATGAAAGAGCTACTCCAAAGTCAGTTCTGGAACTCATGGATGTCAAAGATCTAACACTCGCTCATGTCAAGAGTCACTTGCAGATGTATAGAACTGTTAAGAATACTGACAAGCCAGCAGCTTCCTCAGATGGAGATGAAGATTTCATGTCCCTAGCATCACCCATTAGTCAAAATAAGAACTTTTTACCAAATCAAAGAGGGCCCCCAAATAATAATAATGCATCTCTAGATCAAGATTTGGGATACAACACCACTACTGCTACTACTTGCAGCAATAAAAATCTATGGGGTAATTCTTCTTCCAGTAGAGAAGCATGGATACAAGCCAACGAGCGTAGTCCAGAAACCCTATCATCTCAACACATTATGGGGAAGCTCTCCGAGGGAAGCAACCATATACAATCAAGAAGCTTCAAGGATCAAAATAATTTAGATTGTCAGAATAATCCAAGCTTGGAATTCACCTTAGGGAGATGA 1107 0.4192 MGENVIPDLSLQISLPKSAPPSICNNEEEGDCGGFDIWRSSTTTSDGAEKSHSDGSISIPTTLLHHHKNMETQLSLAAPTTPTPSEAESPWNKSSSSSEQVVIRPINGIPLYNNNNTPSSPLSRFNNAITMESLRTLNHHHLFGVIGGANNNTDFTNGFVMRSRMFPSSTTTTTRMMIHSSKRNMRAPRMRWTTSLHARFVHAVQLLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKNTDKPAASSDGDEDFMSLASPISQNKNFLPNQRGPPNNNNASLDQDLGYNTTTATTCSNKNLWGNSSSSREAWIQANERSPETLSSQHIMGKLSEGSNHIQSRSFKDQNNLDCQNNPSLEFTLGR* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2662 368 MobiDBLite consensus disorder prediction 348 368 - -
Ahy5g2662 368 MobiDBLite consensus disorder prediction 35 59 - -
Ahy5g2662 368 SUPERFAMILY Homeodomain-like 185 242 IPR009057 -
Ahy5g2662 368 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 5 125 - -
Ahy5g2662 368 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 152 368 - -
Ahy5g2662 368 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 188 241 IPR006447 GO:0003677
Ahy5g2662 368 MobiDBLite consensus disorder prediction 76 99 - -
Ahy5g2662 368 MobiDBLite consensus disorder prediction 37 59 - -
Ahy5g2662 368 Pfam Myb-like DNA-binding domain 189 240 IPR001005 -
Ahy5g2662 368 Gene3D - 187 244 - -
Ahy5g2662 368 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 5 125 IPR044847 GO:0000976|GO:0006355|GO:0010158
Ahy5g2662 368 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 152 368 IPR044847 GO:0000976|GO:0006355|GO:0010158
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2662 Ahy-Chr5 103487240 103496761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2662 104 368 G2-like Transcription Factor Family AT5G16560 43.042 2.75e-48 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Ahy5g2662 Myb_DNA-binding 1.00E-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2662 - - aip:107644092 692.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2507 15 138786254 138795820 Ahy5g2662 5 103487240 103496761 hybridization