Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2645 ATGGAATCTAATAAGAGGAATAGTGTTAATAATAATAGCCAGAACTACCAACAAGAACAATTTCAATTTGAAGAGGAACATGAACAGGAACAAGATCAAGAAGCAGCATGTTATGAAGAAGAAGAAGAAGAGGAAGATCAAGATGATGAAAAAAATAATGAGATCCTCAAGAGAAGAATCTCTAATCACCCTCTCTATGGACTCTTGGTTGAAGCTCACTTGGAGTGTTTGAAGGTTGGTGACATATCGAACTTGGACAGACAGCTGAAGATAGATCCAATACAAGCAATGAAGCAACAAAACTTGAACATGTTCAGCCAATCAGAGCTTGATATCTTCATGGAAGCATATTGCATGGCACTTGGGAAGCTGAAAAAAGCAATGGAGGAACCGCAACAGAAGTCAATGGCTTTCATAAACAACATGCATTCACAACTCAGGGAGCTGACCACCAAGGCCACCGCCATGCCTCCTCCTTCTGAAGCTTCTGGTGCTTCTTCAAGTAGTAGTGACTGCAAGTTCAGAAGAAACCCTAATATCTAG 543 0.4052 MESNKRNSVNNNSQNYQQEQFQFEEEHEQEQDQEAACYEEEEEEEDQDDEKNNEILKRRISNHPLYGLLVEAHLECLKVGDISNLDRQLKIDPIQAMKQQNLNMFSQSELDIFMEAYCMALGKLKKAMEEPQQKSMAFINNMHSQLRELTTKATAMPPPSEASGASSSSSDCKFRRNPNI* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2645 180 Coils Coil 13 59 - -
Ahy5g2645 180 PANTHER FUSED COMPOUND LEAF 1 34 153 - -
Ahy5g2645 180 SMART KNOX1_2 54 100 IPR005540 GO:0003677|GO:0005634
Ahy5g2645 180 MobiDBLite consensus disorder prediction 1 52 - -
Ahy5g2645 180 MobiDBLite consensus disorder prediction 1 20 - -
Ahy5g2645 180 MobiDBLite consensus disorder prediction 25 50 - -
Ahy5g2645 180 MobiDBLite consensus disorder prediction 154 180 - -
Ahy5g2645 180 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 34 153 - -
Ahy5g2645 180 Pfam KNOX1 domain 56 80 IPR005540 GO:0003677|GO:0005634
Ahy5g2645 180 SMART KNOX2_2 100 151 IPR005541 GO:0003677|GO:0005634
Ahy5g2645 180 Pfam KNOX2 domain 107 150 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2645 Ahy-Chr5 103110410 103115736 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2645 54 149 Homeobox Transcription Factor Family AT4G08150 36.893 4.08e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2645 - - aip:107642073 247.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2523 15 139436652 139441979 Ahy5g2645 5 103110410 103115736 hybridization