Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2624 ATGCATCGCAACAAACTCATCATTCTCTTCTTCCTCATCCTCCTTCCTTATGCCAAACCCGACCTCTCTTCCGCCCAACGAGCCGCACTCCTCAACCTACGCTCCGCCGTCGGAGGCCGCACGCTCCTCCTCTGGCTCCCAACCTCTACAACCTCCCCATGCAAGTGGCCAGGCATTCTCTGCGACCCAACCAACACCCACGTCATCGCCCTCCGTCTCCCCGCCGCCTCACTCTCCGGCCACCTCCCCTCCGCCGTGTTTCCCTCCTTCACCCACCTCCGCACCCTCTCTTTCCGCTTTAACTCACTCTCCGGCCCCATTCCCGCCGACCTCTCCCTCTGCTCCTCCCTCCGCAACCTCTACCTCCACCATAACAACCTCTCCGGCGAGCTTCCACCTTCTCTCTTCAACCTCACCTCTCTCGTTCGCCTCAACCTGGCAGATAACGCCTTTTCAGGCCCGGTTCGAACCGGCTTCAACAATTTGACCCGCTTGAGGACCCTCTACCTCGAGAACAACCGGTTTTCCGGGTCGCTACCCGAGTTGAAAAGACTCGCCGAGTTGGCTCAGTTCAACGTTTCCAACAACTTTCTCAACGGTTCTGTGCCTGAAACGTTGACGGGCTTCTCAAAGGAGTCATTTTTAGGGAACACATTGTGTGGGAAGCCATTGAAGTTGTGTCCTCAGAGTGAGAATGGGAGAAGGGCAAATGGGTCTTTTCCAGGCGTGGCTGCCGGAATTGGGAACAGTGGTTTGAAGGAGGAGAAGAAAGGGAAGCTAAGTGGTGGGGTCATTGCTGGGATTGTGATTGGGTGTGTGGTTGGAATGTTGCTAATTGTGTTTGCTTTGATTCTTCTGTGTAGGAAGAAGAGTGATAACAGAACCAGTAACATTGAAAATATTGCAACTTTGAAGCAGGGTAATGGTAGGGGAATCCATGGTGAGAAAAATCATGTTTCTGAAGTGGAGACTGTCGGTGGTGGTGCGAACAAGAAGCTGGTTTTCTTTGGGAATTCAGAAGGGAAGGTGTTTGATTTGGAGGATTTGCTTAGAGCCTCTGCTGAGGTTTTAGGGAAGGGTACTTTTGGAACTTCATATAAGGCTGTGTTGGAGAATGGGCCTGTGGTGGCTGTGAAGAGGCTCAAGGATGTGACACTCTCTGAGAGTGACTTCAGGGATGAGATTGAGGTTGCTGGAGCAATGGTTCATCAGAATTTGGTGCCTCTTAGGGCTTACTATTATAGCAGGGATGAGAAGCTTCTTGTTCATGATTATATGCATATGGGAAGCTTGTCTGCACTCTTGCATGGAAACAAAGGAGCTGGCAGAACACCACTGACTTGGGAACTCAGGTCAGGGATTGCGCTTGGGGCTGCTCGCGCCGTTGAGTACTTACATTCACAAGGGCCTAATGTATCTCATGGAAACATAAAGTCATCAAACATCCTCCTAACCAAGAACTATGAAGCCAGAGTATCCGACTTTGGCCTTGCACAACTTGTTAGCCCCTTGTCGACCCCCAATAGGATTGCCGGCTACCGTGCTCCTGAGGTAACTGGTCCTCGCAGAGTGTCGCACAAGGCCGATGTGTACAGCTTTGGCGTGGTGCTCTTGGAGCTTCTTACCGGAAAGGCTCCAACTCACGCCTTGTTGCATGAGGAAGGAGTGGACCTTCCGAGATGGGTGCAATCGGTTGTTAGGGAAGAGTGGACTTCTGAGGTCTTTGATGCCGAGCTCCTTAGCCATCAGACTGTGGAAGAGGATATGGTTGAGTTGTTGCAGCTTGCAGTGGATTGTACAGCTCCATATCCCGATAATCGACCTTCGATCGCCGAAGTGAGACACCGGATAGAAGAGCTACGTGGTTCTAAGGATCTAAAGCAAACCCAGCACCAACATGATTTGATCAGTGTTGTAGATGATCTATCTTGA 1932 0.5135 MHRNKLIILFFLILLPYAKPDLSSAQRAALLNLRSAVGGRTLLLWLPTSTTSPCKWPGILCDPTNTHVIALRLPAASLSGHLPSAVFPSFTHLRTLSFRFNSLSGPIPADLSLCSSLRNLYLHHNNLSGELPPSLFNLTSLVRLNLADNAFSGPVRTGFNNLTRLRTLYLENNRFSGSLPELKRLAELAQFNVSNNFLNGSVPETLTGFSKESFLGNTLCGKPLKLCPQSENGRRANGSFPGVAAGIGNSGLKEEKKGKLSGGVIAGIVIGCVVGMLLIVFALILLCRKKSDNRTSNIENIATLKQGNGRGIHGEKNHVSEVETVGGGANKKLVFFGNSEGKVFDLEDLLRASAEVLGKGTFGTSYKAVLENGPVVAVKRLKDVTLSESDFRDEIEVAGAMVHQNLVPLRAYYYSRDEKLLVHDYMHMGSLSALLHGNKGAGRTPLTWELRSGIALGAARAVEYLHSQGPNVSHGNIKSSNILLTKNYEARVSDFGLAQLVSPLSTPNRIAGYRAPEVTGPRRVSHKADVYSFGVVLLELLTGKAPTHALLHEEGVDLPRWVQSVVREEWTSEVFDAELLSHQTVEEDMVELLQLAVDCTAPYPDNRPSIAEVRHRIEELRGSKDLKQTQHQHDLISVVDDLS* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2624 643 Pfam Leucine rich repeat N-terminal domain 24 62 IPR013210 -
Ahy5g2624 643 PANTHER OS05G0588300 PROTEIN 6 328 - -
Ahy5g2624 643 PANTHER OS05G0588300 PROTEIN 323 643 - -
Ahy5g2624 643 Gene3D Ribonuclease Inhibitor 25 136 IPR032675 -
Ahy5g2624 643 Pfam Protein kinase domain 354 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g2624 643 Gene3D Ribonuclease Inhibitor 137 225 IPR032675 -
Ahy5g2624 643 Gene3D Phosphorylase Kinase; domain 1 315 425 - -
Ahy5g2624 643 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 6 328 - -
Ahy5g2624 643 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 323 643 - -
Ahy5g2624 643 SUPERFAMILY Protein kinase-like (PK-like) 355 617 IPR011009 -
Ahy5g2624 643 Gene3D Transferase(Phosphotransferase) domain 1 426 642 - -
Ahy5g2624 643 SUPERFAMILY L domain-like 39 211 - -
Ahy5g2624 643 ProSiteProfiles Leucine-rich repeat profile. 164 186 IPR001611 GO:0005515
Ahy5g2624 643 ProSiteProfiles Protein kinase domain profile. 351 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2624 Ahy-Chr5 102584770 102588026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2624 24 623 Receptor kinase-like Gene Family AT3G17840 60.703 0.0 699
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Ahy5g2624 Pkinase 2.70E-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2624 - - gmx:100781597 788.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2571 15 140750913 140754121 Ahy5g2624 5 102584770 102588026 hybridization
Ahy13g4004 13 139451565 139454406 Ahy5g2624 5 102584770 102588026 PCT
Ahy3g3729 3 136638417 136641378 Ahy5g2624 5 102584770 102588026 PCT
Ahy5g2624 5 102584770 102588026 Ahy13g4004 13 139451565 139454406 PCT
Ahy5g2624 5 102584770 102588026 Ahy3g3729 3 136638417 136641378 PCT