Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2621 ATGGAGAGAGATTTTTTTGGTTTGAGCTCCAAAAGTGATGCAGGGACTACTATCAAAGACGATGCAGTGAGGGGTTCAGGAATGCAGTGGACATTCTCAAACAAAGTCTCATCCATTCCTCAGTACTTGTCCTTCAAGACGACTCTGGAAGATCAGAGAAAGACAATTATGGATCCCCTAGCTTCATCTGGATATATGACCATATCAACTAAGGATGCTTATGACACTGACCAGAAACCATTGTTGAGTGTGGTCCAGAGGAATTTGTCCATCGGAAAGCAAGCCGGAAACAACATTGGAATGACAGTGTATCCACCGCTATGTTCTGGTTCACATTTAGCTAGCCAACAACAGGAATCAAGAATATTTTCACTTTCCAACCAAACAAATAAAGTAAGTCCTGTTCTTCAATCTAACCTTGCTACTACTACCGGACATAGCATGGTTGCTTCAGTCATAAAACCACAAGCACTCGGTTCCAAATCAACCAGCACACCTGTATCTGCTCTTCCATCTGCGAGTTCCATTGTTGGAACTACCGAATTAAGGAATTGTTCCAAGTCTTCTGGGACACCTACTCAGCTGACCATTTTCTATGCCGGTTCAGTATGTGTTTATGATGACATATCTCCTGAGAAGGCCCAGGCTATCATGTTACTTGCTGGAAATGGCTCTGCTCTAAATCAGAACAACACAGTTTCTACAACTAAATTGCAGCCAGCAATGTCTGTTCCCTCCAAAGATAATGGTTTCATTGTAGGCATGCCAATTTCTCTTCCATCGACTTCTCTCCTCGTTTCTCGTCCTGGAGGAGCGTTGGTGGCAGTAGGACCTTCGACTACCTCTACCAACAATTTGGAATCTCCTAATGTTGTTTCAATAAGATCTGCATCTCAAAAAATGGTTAACACAGTAGGGTTGCCTCAGGCACGCAAAGCATCGTTGGCTCGGTTCTTGGAGAAGCGAAAGGAAAGGGTTATGAGCACATCTCCCTACACTTTAAGCAAGAAATCTTCCCCTGAAAGCAGCAATCCTGGATCAGATACTATTAGTCTTTCCATGAACTCCTCCGGTTCCTGTTCGCTACCAGCCATTAACTAA 1101 0.436 MERDFFGLSSKSDAGTTIKDDAVRGSGMQWTFSNKVSSIPQYLSFKTTLEDQRKTIMDPLASSGYMTISTKDAYDTDQKPLLSVVQRNLSIGKQAGNNIGMTVYPPLCSGSHLASQQQESRIFSLSNQTNKVSPVLQSNLATTTGHSMVASVIKPQALGSKSTSTPVSALPSASSIVGTTELRNCSKSSGTPTQLTIFYAGSVCVYDDISPEKAQAIMLLAGNGSALNQNNTVSTTKLQPAMSVPSKDNGFIVGMPISLPSTSLLVSRPGGALVAVGPSTTSTNNLESPNVVSIRSASQKMVNTVGLPQARKASLARFLEKRKERVMSTSPYTLSKKSSPESSNPGSDTISLSMNSSGSCSLPAIN* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2621 366 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 293 366 - -
Ahy5g2621 366 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 28 264 - -
Ahy5g2621 366 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 293 366 IPR040390 -
Ahy5g2621 366 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 28 264 IPR040390 -
Ahy5g2621 366 Pfam tify domain 191 222 IPR010399 -
Ahy5g2621 366 Pfam Jas motif 308 332 IPR018467 -
Ahy5g2621 366 ProSiteProfiles Tify domain profile. 188 223 IPR010399 -
Ahy5g2621 366 SMART tify_2 188 223 IPR010399 -
Ahy5g2621 366 MobiDBLite consensus disorder prediction 328 366 - -
Ahy5g2621 366 MobiDBLite consensus disorder prediction 327 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2621 Ahy-Chr5 102475923 102481093 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2621 28 339 Tify Gene Family AT3G17860 41.768 3.20e-54 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Ahy5g2621 tify 3.80E-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2621 K13464 - gmx:100807288 419.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2573 15 140852747 140857941 Ahy5g2621 5 102475923 102481093 hybridization