Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2620 ATGGCATCAAGGCCAAATAAGAAACTAGGCTCAAACAAGAACCTAGAGAGTTTATTAGACATGGATCAAGCAGGAGGAGTTGTGAAAAAATTGAATAATCAACTTAGACCACAGAACTCTGTTCCTGGAACAGGGCTAGAATTTAGTAACCTTTCTTATAGTGTCATAAAGAAGCAGAAGAAGGATGGGGTTTGGATGAAGAAGGAAGCATATCTTCTTCATGACATCTCCGGCCAGGCCAACAAAGGCGAAATCATGGCGATCATGGGGCCGAGTGGTGCTGGAAAATCCACCTTTCTTGATGCCTTGGCAGGGAGAATTGCTCAAGGGAGTCTTGAAGGATCAGTTAGAATTGATGGAAAACCAGTGACTACAAGTTACATGAAGATGGTCTCATCATATGTGATGCAAGATGATCAATTGTTCCCTATGTTGACAGTTTTTGAGACATTCATGTTTGCAGCTGAGGTTAGGCTTCCTCCTTCAGTTTCAAGGGAGGAAAAGAGGAAGAGGGTTTATGAGCTTCTTGATCAACTTGGCTTGCAGAGTGCAACACATACATATATTGGTGATGAGGGAAGAAGAGGAGTATCAGGAGGGGAGAGAAGAAGGGTGTCCATTGGCATAGACATAATTCATAAGCCATCCCTTTTGTTCCTTGATGAACCAACCTCAGGACTTGATTCAACAAGTGCCTACAGTGTTGTTGAAAAGGTTAAGGACATAGCAAGAGGAGGTAGCATTGTCCTCATGACCATACATCAACCTTCATTTAGAATTCAAATGCTCCTTGACAAGATCACGGTCTTAGCGAGGGGAAGGCTTGTATACATGGGAAAGCCAGATTTACTGGGTGTATTCCTTTCTGGATTTGGAAGGACAGTACCAGATGGAGAGAACAGCATGGAGTACCTATTAGATGTCATCAAAGAATATGAGCAATCCACCATTGGACTTGACCCTCTTGTTCTTTACCAACGCGACGGCCTCAAACCAGATCAAGCCGCCAAAACACCAGTCCCAAGAACACCAAGAACAGCTTACACAAGGAAGAACAACCCTGCTGGTGCTTCAAAACACATGATTAGCCTAAAATCTCAAGGATTCACGGCCGGAACATCAGTTCCTGATTCCTCAAACTTCAGTTATGGCTATAATTATGAAGACGAAGGCGAAGATGATTATGAGAATTTTGACAATTCTCTTGAGAGGAGAAGTGCTACTACTGCTCAAACTCCAAGGACTATGGCCAGTGGTGTCCATCCCCGGTTGGCTTCGCAGTTTTACAAAGATTTCTCTGCCAAGGATTTCTCTGTTTGGCTCTACCACGGCGTGGTAGGGACACCTCGCCGCGCGCCCTCTTGGACGCCAGCTAGGACACCAGGGGTGACACCTATGTCAGCTTCTAGAAGTGTTATGACAAGCCAACAACAAGATCCTTATTATGCTCGCGCAAAAACACCTTCACTAGTTAGCCAATCCATGAACATCTATGCAACTTCATATCAAGAATTTGATATTGAAGAAGAAGTGCTTGATGAACCAAGCCATGGATCAAAGTATGCAAATCCATGGCTTCGCGAGGTAGTCGTGCTCTCATGGAGGACAATGCTGAATGTTATTCGAACTCCAGAGCTATTCCTGTCCAGAGAGATTGTCCTAACTGTCATGGCACTTGTCCTCTCCTCTATCTTCAAGAATCTAAGCCACACAACTTGCTTAGACATCAATAGGCTCCTCAACTTCTACATCTTTGCAGTATGCTTAGTCTTCTTCTCTTCGAATGACGCCGTCCCTTCCTTCATCCTGGAGAGGTTTATCTTCATTAGGGAGACTTCTCACAACGCTTATCGCGCATCATCCTATGTCATTTCTTCCCTTCTTGTTTACCTCCCTTTCTTCGCCGTCCAGGGACTAACTTTCGCAGCCATAACAAAGTTTTTGCTCCATCTTAAAAGCAAACTCTTGTACTTTTGGCTAATCCTTTTTGCTTCTCTTATAACCACCAATGCATATGTGATGCTTGTTAGTGCTCTTGTTCCAAGTTACATCACAGGATACGCGGTTGTTATAGCAACAACCGCGCTGTTCTTCTTGACATGTGGCTTCTTCCTCAAGCGAACTCAGATACCAGTGTATTGGAGGTGGTTGCATTACATTTCTGCTATCAAATACCCTTTTGAAGCATTGCTGACGAACGAATTCGACAACAACAACTGCTACACAGGGAACCTAGCCGATCTGTCTCCGGGTCCAATGGGAGATTTAAAGTTTAGCCAACAACACAATTTCAGCAGTAACTGCATTTTGATTGGGAAGGATGTGTTGGAGACAATGGATATTCAGTTGGATAATGTATGGTATGATATCTTGATCCTGCTAGCTTGGGGTGTTCTTTACAGGTTCTTCTTCTACTTGGTACTGAGATTTTACTCCAAGAATGAGAGAAAATGA 2454 0.4368 MASRPNKKLGSNKNLESLLDMDQAGGVVKKLNNQLRPQNSVPGTGLEFSNLSYSVIKKQKKDGVWMKKEAYLLHDISGQANKGEIMAIMGPSGAGKSTFLDALAGRIAQGSLEGSVRIDGKPVTTSYMKMVSSYVMQDDQLFPMLTVFETFMFAAEVRLPPSVSREEKRKRVYELLDQLGLQSATHTYIGDEGRRGVSGGERRRVSIGIDIIHKPSLLFLDEPTSGLDSTSAYSVVEKVKDIARGGSIVLMTIHQPSFRIQMLLDKITVLARGRLVYMGKPDLLGVFLSGFGRTVPDGENSMEYLLDVIKEYEQSTIGLDPLVLYQRDGLKPDQAAKTPVPRTPRTAYTRKNNPAGASKHMISLKSQGFTAGTSVPDSSNFSYGYNYEDEGEDDYENFDNSLERRSATTAQTPRTMASGVHPRLASQFYKDFSAKDFSVWLYHGVVGTPRRAPSWTPARTPGVTPMSASRSVMTSQQQDPYYARAKTPSLVSQSMNIYATSYQEFDIEEEVLDEPSHGSKYANPWLREVVVLSWRTMLNVIRTPELFLSREIVLTVMALVLSSIFKNLSHTTCLDINRLLNFYIFAVCLVFFSSNDAVPSFILERFIFIRETSHNAYRASSYVISSLLVYLPFFAVQGLTFAAITKFLLHLKSKLLYFWLILFASLITTNAYVMLVSALVPSYITGYAVVIATTALFFLTCGFFLKRTQIPVYWRWLHYISAIKYPFEALLTNEFDNNNCYTGNLADLSPGPMGDLKFSQQHNFSSNCILIGKDVLETMDIQLDNVWYDILILLAWGVLYRFFFYLVLRFYSKNERK* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2620 817 Pfam ABC-2 type transporter 529 735 IPR013525 GO:0016020|GO:0140359
Ahy5g2620 817 ProSitePatterns ABC transporters family signature. 197 211 IPR017871 GO:0005524
Ahy5g2620 817 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 282 IPR027417 -
Ahy5g2620 817 PANTHER ABC TRANSPORTER 7 811 - -
Ahy5g2620 817 Gene3D - 45 286 IPR027417 -
Ahy5g2620 817 Pfam ABC transporter 73 225 IPR003439 GO:0005524
Ahy5g2620 817 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 46 297 IPR003439 GO:0005524
Ahy5g2620 817 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 7 811 - -
Ahy5g2620 817 SMART AAA_5 82 282 IPR003593 -
Ahy5g2620 817 MobiDBLite consensus disorder prediction 333 357 - -
Ahy5g2620 817 MobiDBLite consensus disorder prediction 452 471 - -
Ahy5g2620 817 CDD ABCG_EPDR 46 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2620 Ahy-Chr5 102472106 102476059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2620 83 284 Calmodulin-binding Proteins AT2G36910 25.837 7.09e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2620 K05681 - gmx:100819497 1251.88