Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2598 ATGTGGATGGTGGGTTACAATGAAGGTGGAGGTGGCGATCATCATCACCATCAGTTAAACATGGTTGTTGATCACCATCATCATCATCACCATCATCATCCATTCGGAGCTTCTGGAAGAAAGCTAAGGCCTCTCATGCCAAGACCAATGACTTCTCCTAACAACTCAACAACAACGACAACAACAACAACAACCAATAACAACAACAACAACAACCCATGCTTAAGCCTTGTTCATCATCAGGGCAACGATTTCTTCTCTCAATATCACAACCATTTATCGACAGTGGGAGAGCAGAACAAGAGGGAAAATGGTAACAACAACAATAATGGTTCGGCACCGGTTGTGGTGAGTTCCCGGTGGAATCCAACGCCGGAGCAGCTGAGAGCGCTTGAGGAGCTGTACAGAAGAGGGACTCGGACGCCGTCGGCGGAGCAAATCCAACACATAACAGCGCAGCTGAGAAGGTTTGGGAAGATTGAGGGCAAGAATGTCTTTTACTGGTTTCAGAATCATAAGGCTAGGGAGAGGCAAAAGCGTCGCCGCCAGATGGAATCATCTGATACCAATAACAATAATCATCCACTTCAAAACAACAATCACCACCGTGATTTTGATTCTTCTTCTGAAAAGAAAGAACTGGCAGCAAGTAGGACAATGGTTGAAGTTGAACAGACCAAAAACTGGGCATCCTCTACAAACTGCACTACTCTTGCAGAGGAATCTGTTTCAATGGAAAGAGAGGGAGGAGCAGGAAAAGCAGGAGTGGCAGAGTGTAGAGCAGATGGATGGGTCCAATTCGAAGAAGGGGAATTACAACAAAGAAGGAACTTTATGGAAAGGAATGCCACGTGGCACATGATGATGCATCATCACTCCCCATGTGCTGCTGCTGCACCACCTGCACCTGCACCACCTGTCACACACCTCATAAATGCCCCTCCTCCTCCTCCTACTTCTTCTTCCTCTCTTCCTCTTCTTCTTCCTCTTCAACCATCAAAGCTCATTAATAATAATAATAATAATAATCTCAGCTTCTTTATTTCATCAGAAAACAATTACAACAACACCACTCTTCTCCACTTAACCACCACTCATAGCAATGAAGAAGATGATGATGTTCTTGTTGATAATAGTATTATTAACATTCATCAGAATGAGAATCAAACCCTTCAACTTTTCCCTCTAAGGAGCGGTGACGATCTTCATCATCACATTAACGGCAAAGGGACAGAGATATCAGCATCAAATGATGCCATCACCCCAAACCACCATCACTTCTTTGAGTTCCTTCCTTTGAAGAACAACTAA 1311 0.4409 MWMVGYNEGGGGDHHHHQLNMVVDHHHHHHHHHPFGASGRKLRPLMPRPMTSPNNSTTTTTTTTTNNNNNNNPCLSLVHHQGNDFFSQYHNHLSTVGEQNKRENGNNNNNGSAPVVVSSRWNPTPEQLRALEELYRRGTRTPSAEQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQMESSDTNNNNHPLQNNNHHRDFDSSSEKKELAASRTMVEVEQTKNWASSTNCTTLAEESVSMEREGGAGKAGVAECRADGWVQFEEGELQQRRNFMERNATWHMMMHHHSPCAAAAPPAPAPPVTHLINAPPPPPTSSSSLPLLLPLQPSKLINNNNNNNLSFFISSENNYNNTTLLHLTTTHSNEEDDDVLVDNSIINIHQNENQTLQLFPLRSGDDLHHHINGKGTEISASNDAITPNHHHFFEFLPLKNN* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2598 436 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 65 435 - -
Ahy5g2598 436 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 65 435 IPR044555 GO:0003700|GO:0099402
Ahy5g2598 436 MobiDBLite consensus disorder prediction 172 225 - -
Ahy5g2598 436 ProSiteProfiles 'Homeobox' domain profile. 124 179 IPR001356 GO:0003677
Ahy5g2598 436 SUPERFAMILY Homeodomain-like 119 184 IPR009057 -
Ahy5g2598 436 MobiDBLite consensus disorder prediction 199 218 - -
Ahy5g2598 436 Pfam Homeodomain 119 178 IPR001356 GO:0003677
Ahy5g2598 436 MobiDBLite consensus disorder prediction 25 70 - -
Ahy5g2598 436 Gene3D - 117 179 - -
Ahy5g2598 436 MobiDBLite consensus disorder prediction 98 119 - -
Ahy5g2598 436 SMART HOX_1 116 183 IPR001356 GO:0003677
Ahy5g2598 436 MobiDBLite consensus disorder prediction 49 70 - -
Ahy5g2598 436 CDD homeodomain 120 180 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2598 Ahy-Chr5 102124025 102127224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2598 1 435 Wox Gene Family AT3G18010 33.787 1.54e-55 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Ahy5g2598 Homeodomain 1.60E-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2598 - - adu:107490490 701.434