Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2563 ATGGATCGTAACAAAAAGGGTGCACCGGAAGATAAGTTTTTTACCGAGTACGGAGAGGCAAGCCGATATGAGATCCAAGAAGTTGTTGGAAAAGGAAGCTATGGTATTGTGGGTGCTGCCATTGACACTCATACTGGGGAAAAAGTTGCAATCAAGAAAATTAATGATGTTTTTGAGCATGTATCGGATGCCACACGAATCCTAAGAGAAATAAAGCTACTTCGGTTGCTTCGACATCCTGATATAGTAGAAATTAGGCATATAATGCTTCCTCCTTCTCGGAGAGAGTTCAAGGATGTATATGTTGTATTTGAGTTGATGGAGTCTGACCTTCATCAAGTCATTAAAGCAAATGATGACCTTTCGCCTGAACACTACCAGTTTTTCTTGTACCAACTTCTTCGGGGTCTAAAATACATACATTCAGCTAATGTCTTTCATCGCGACTTAAAGCCGAAAAATATTCTTGCTAATGCTGATTGTAAACTTAAGATATGCGATTTTGGGCTTGCTCGAGTATCATTCAATGAAGCCCCGTCAGCTATTTTCTGGACTGACTACGTTGCAACTCGATGGTATCGTGCACCTGAACTATGCGGTTCTTTTTTCTCAAAATATACCCCCGCTATTGATATTTGGAGCATTGGATGCATATTTGCAGAAATGCTCACTGGGAGGCCATTGTTTCCTGGGAAAAATGTGGTGCATCAATTGGATCTCATGACCGATTTGCTTGGTACTCCTCCTGCTGAATCCATTTCCAGGATTCGAAATGAGAAGGCTAGAAGGTATCTTAGTAGCATGCGGAAAAAACAACCAGTTCCCTTCACCAAAAAATTTCCAAATGCAGATGTGCTGGCTCTTCGTTTGCTGGAACGGCTACTTGCATTTGATCCTAAAGATCGTCCAACAGCTGAAGAGGCATTAGCTGATCCTTACTTCAATGGTTTGGCAAGTGTAGATCGCGAACCATCCACTCAGCCCATTTCAAAGCTTGAGTTTGAGTTTGAGAGAAGGAAATTGACCAAAGATGATGTCAGAGAGTTGATTTATCGAGAGATTCTAGAGTATCATCCACAGATGCTCCAAGAATATCTTCGTGGTGGAGAGCAAACAAGTGGTTTCATGTATCCAAGCGGAGTTGATCGGTTTAAGCGACAATTTGCGCATCTTGAGGAACTTCAAGGCAAAGGTGAACGAAGCACCCCGTTGCAGAGACAGAATGTCTCCTTACCTAGAGAGCGAGTTGCTGCTTCCAACGATGAAACTGACAAGGATGGTGAACAACAGAGTCCTTCAGATACGCCAGGTTCACGGAGCTTATTGAAAAGTGCTAGCATTACTTCCAAGTCTTATGTCAAAGCAAATAGAGATCCAGAGGAGCCAATTATGGAAGCCAATGATGAGGTGGCTGAGATGACGGAGAAAATTGCTGTCCTCCATGCTTAG 1449 0.4272 MDRNKKGAPEDKFFTEYGEASRYEIQEVVGKGSYGIVGAAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIRHIMLPPSRREFKDVYVVFELMESDLHQVIKANDDLSPEHYQFFLYQLLRGLKYIHSANVFHRDLKPKNILANADCKLKICDFGLARVSFNEAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGRPLFPGKNVVHQLDLMTDLLGTPPAESISRIRNEKARRYLSSMRKKQPVPFTKKFPNADVLALRLLERLLAFDPKDRPTAEEALADPYFNGLASVDREPSTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLRGGEQTSGFMYPSGVDRFKRQFAHLEELQGKGERSTPLQRQNVSLPRERVAASNDETDKDGEQQSPSDTPGSRSLLKSASITSKSYVKANRDPEEPIMEANDEVAEMTEKIAVLHA* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2563 482 Pfam Protein kinase domain 23 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g2563 482 MobiDBLite consensus disorder prediction 430 453 - -
Ahy5g2563 482 Gene3D Transferase(Phosphotransferase) domain 1 109 337 - -
Ahy5g2563 482 MobiDBLite consensus disorder prediction 400 414 - -
Ahy5g2563 482 ProSitePatterns Protein kinases ATP-binding region signature. 29 53 IPR017441 GO:0005524
Ahy5g2563 482 ProSiteProfiles Protein kinase domain profile. 23 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g2563 482 CDD STKc_TDY_MAPK 22 359 - -
Ahy5g2563 482 MobiDBLite consensus disorder prediction 395 469 - -
Ahy5g2563 482 MobiDBLite consensus disorder prediction 454 469 - -
Ahy5g2563 482 ProSitePatterns MAP kinase signature. 58 161 IPR003527 GO:0004707|GO:0005524|GO:0006468
Ahy5g2563 482 SMART serkin_6 23 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g2563 482 Gene3D Phosphorylase Kinase; domain 1 39 360 - -
Ahy5g2563 482 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 8 446 - -
Ahy5g2563 482 SUPERFAMILY Protein kinase-like (PK-like) 17 318 IPR011009 -
Ahy5g2563 482 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 8 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2563 Ahy-Chr5 101321832 101327349 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2563 5 481 MAP Kinase Gene Family AT1G73670 75.296 0.0 780
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Ahy5g2563 Pkinase 8.50E-68 CL0016