Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2540 ATGTGCTTTCACCCAAGACTCAGGTGGAGGATTCCAGTTAAATACGTGGCTAAGCTTGAAGATGGGACGGTTGTTTTGAAATCTGATGGGGTGGAGTTCACCGTGGAAGGTGGTCAGTCATCGAGTTTGTGCTCAAGTTATTTCTGTCCTGCATTGGCCAAGGCTGTGAAAACAATGAAGAAGGGAGAGAAAGTCATCCTGACCGCGAAGCCAGAATATGCGTTTGGTGAGAATGGAAGGCCAGCATCAGGTGATGAAGGTGCCGTGCCTTGGAATGCTTCTCTGCAAATTGATCTCGAGTTGGTATCTTGGAAGGCTGTATCTGACATAACCAAGGATAAGAAGGTTCTCAAGAAGACCCTGAAGGAGGGAGAGGGATATGAATGTCCCAATGATGGAGCTGTGGTTCAAGGTGCAAGATGGGACTGTTTTCGTGAAGAAGGGTCATGA 450 0.4756 MCFHPRLRWRIPVKYVAKLEDGTVVLKSDGVEFTVEGGQSSSLCSSYFCPALAKAVKTMKKGEKVILTAKPEYAFGENGRPASGDEGAVPWNASLQIDLELVSWKAVSDITKDKKVLKKTLKEGEGYECPNDGAVVQGARWDCFREEGS* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2540 149 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 10 102 IPR001179 GO:0003755
Ahy5g2540 149 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 8 105 IPR001179 GO:0003755
Ahy5g2540 149 SUPERFAMILY FKBP-like 10 107 - -
Ahy5g2540 149 Gene3D - 4 105 IPR046357 GO:0003755
Ahy5g2540 149 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 108 - -
Ahy5g2540 149 PANTHER PEPTIDYLPROLYL ISOMERASE 9 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2540 Ahy-Chr5 100992310 100995708 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2540 4 137 Calmodulin-binding Proteins AT3G25230 65.672 6.10e-52 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2540 K09571 - aip:107644240 241.891