Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2536 ATGCATCATCATGCAAAGACAGACTCAGAGGTAACAAGCGTTGCAACTTCATCGCCGGCGAGATCACCGCCGCGCCGCCCTCTCTACTACGTCCAGAGCCCTTCAAGGGACTCCCACGACGGCGAGAAGACTGCCACGTCAGCTTCCTTCCACTCCACGCCTCTCCTGAGCCCCGCCGCGTCACCTCCACGCGCCTCCACCACTCGCAGCAACAGCAACAGCAACCTCAACGGCAAGAGCACCATCAAGGACCACCGCCACCACCACCGGAGCCACAACAACAAGGCCTGGAACAGCCACATCGATGCCATTGACGAAGAAGACCTTCTCTACGGCGACGATCGACACGATAAAACTCTCCCTCGCCGCTGCTATGTTCTAGCTTTTGTTCTTGGCTTCCTTGTTCTCTTCAGCTTCTTCTCTCTCATACTTTGGGGTGCCAGCAGACCCATGAAGCCCAAGATTTCCGTCAAGAGCATAAAGTTCGACCATCTTAGAGTCCAAGCTGGTTCAGATGCTACTGGTGTGGCCACTGACATGATCACTATGAATTCTACACTCAAGTTCACATATCGCAACACTGGCACCTTCTTTGGGATCCATGCATCTGCAACACCTTTGGATCTCTCCTATTCAGATATTGTTATTGCTTCCGGCAATATGAAGGAGTTTTATCAATCTAGGAAGAGTCAAAGGTTGGTGAGTGTTTCAGTTATGGGCAACAAGATCCCTCTCTATGGAAGTGGTAATAGCTTGAGTAGTACAACGGGTGTTCCAACTGTGCCAGTGCCATTGAAACTTAGCTTTGTGGTGAGATCTAGAGCCTATGTTCTTGGGAAATTGGTGAAGCCAAAGTACTACAAGAGGGTTAATTGTTCCATCACTTTGGACCCCAAGAAGCTCAATGCCCTAATTTCTCTCAAGAAGTCTTGCACATATGACGATTGA 948 0.5 MHHHAKTDSEVTSVATSSPARSPPRRPLYYVQSPSRDSHDGEKTATSASFHSTPLLSPAASPPRASTTRSNSNSNLNGKSTIKDHRHHHRSHNNKAWNSHIDAIDEEDLLYGDDRHDKTLPRRCYVLAFVLGFLVLFSFFSLILWGASRPMKPKISVKSIKFDHLRVQAGSDATGVATDMITMNSTLKFTYRNTGTFFGIHASATPLDLSYSDIVIASGNMKEFYQSRKSQRLVSVSVMGNKIPLYGSGNSLSSTTGVPTVPVPLKLSFVVRSRAYVLGKLVKPKYYKRVNCSITLDPKKLNALISLKKSCTYDD* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2536 315 Pfam Late embryogenesis abundant protein 189 284 IPR004864 -
Ahy5g2536 315 MobiDBLite consensus disorder prediction 1 94 - -
Ahy5g2536 315 MobiDBLite consensus disorder prediction 45 79 - -
Ahy5g2536 315 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 77 313 - -
Ahy5g2536 315 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 77 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2536 Ahy-Chr5 100946832 100949236 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2536 - - gmx:100811519 425.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2698 15 143336928 143339292 Ahy5g2536 5 100946832 100949236 hybridization
Ahy13g3934 13 138724520 138725175 Ahy5g2536 5 100946832 100949236 PCT