Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2513 ATGAGGTTGAGGTGTAATCTTCTTCAGTGCTGCTTCACTAGCAGTTCTTCAAATGGTGTTATTCAGATAAAGGGGAAAATCTTCCCCTACTTGATACTTGCACAAGCAACAAATAATTTTAATAAACGTAATTGTCTTGGAAAGATAGGCTTGAAGAATCTATATTATGGCAAACTTAGAGATGGGTGTGAGATTGTAATTGAAAGAGTATCTTCCAATGACAAGAGGCAAATATTTCAGCAGTTCCTCAATGAAATTTTGGTTTCGAATATCCTGGATCACAAAAATCTCGTGACATTTCGCGGTTATGCCTTTCATCATGAGGAATTCCTGGTAGCACATGAATATCTCTCCAATGGCACTCTTGCTGCTTATCTTGAATGTGAAATCCAACATAATAAATGCACATTACCTTTGCTTACTCGAATGGAAATTGCCATCGATATTGCAAACGCATTGAGCTATCTTCACAAGAATGGCATCATCCACCATAACATAAACTCCAGCAATATTCTGCTAGATAAGAACATGTGTGCTAAAGTTGCTGGCTTGCACTTATCAAGGAAACTTCCAGAGGATGTTTCTGTCAATGCCACCAGCATTGTTTCAATTTCAAGTGATATAGCAAAAAATTGTGTTTACATTGACCCAGAGTATGTGTCTCATGGCAGAGTCAGCACCAAGAATGATGTTTATAGCTTCGGAGTAGTGTTGTGCGATTTGATATCATCCAAGCTTGCTAAGTATTGGGAAAGTCGTGACGGAGAAAGTATTGCTGTCCTTTTAGGCAGAAATATTGAAAATCAAGCTTTGGACAAGGTATTGGATCCAAGAACTGGCTTCCAATCAGACCATAAGATCATGCAGGTGATGACTGCAATGGCGGAGCTTGCACTTAATTGCATGGGATTTCCACAAGAACAAAGGCCAAATATGGAACAGGTGCTAGATATCCTCAATGGCAAGAGACTAGAGAGATATAAAACAATAGAAGCTTTCAGAATCTTTGACTTTGCTGATCTCAGAAAAGCTACCATGCAATTTCGTCCAGATAGGATCCTTGGAGAGGGAGGGTTCGGCAGCGTATTTTATGGAAAACTTCAAGATGGACTTGAAGTTGCAATAAAACGTTTCCACAACATGCGGGAAAATTCTCTTAAGCAATTCATGAATGAAATCGAGATCTTAAGACTCTTGCACCATAGAAACCTGGTTTCACTCTACGGCCGCAGCTCTGATGAACATAACGAACTCTTTCTAGTCTATGAGTACGTCCCCAATGGCACTGTCTCTAGACATATTCATGGAGGTAAAATTGAAAAGCTACCATGGCTTACTAGATTGAATATTGCCATAGAAACTGCAACTGCATTGGCATATCTTCATGATTCAGGTATCATACACCGTGATGTAAAAGGAAGTAATATCCTCTTGGATGAAAATTTTTCTGTTAAAGTTGCAGATTTCGGACTCTCACGGTCCCAACCAGATTATGTTACTCATGTGTCAACAGCTCCAGCAGGGACAAATGCCTATATGGATCCGGAATATTTCCAAACAGGCAGGGTTTCCTATAGAAGTGATGTATATAGCTTTGGAGTGGTCTTGTTTGAGCTCATATCATCTAAACCTGCATTTTGGAGGGACGTCCCACACGGCGAGGCGGTTGGCCTCGCTAAGTTTGCAATCATCAAACTGTTAAATAACACATTGAAGGAGCTAGTAGATCCAGATATTGGGTATGATTCAGATAAAGATGTAACGGAAATGGTAACAGCAGTGGCAGAGTTGGCCTTTCAGTGCATTCAGTGTCCTAAAGAGCTTAGACCTTCCATGAAACAGGTGCTGGAGACCCTTGAGGGTATAAAGAAGGGAACATGGGGATTCAACCAGATAACTTAG 1902 0.4038 MRLRCNLLQCCFTSSSSNGVIQIKGKIFPYLILAQATNNFNKRNCLGKIGLKNLYYGKLRDGCEIVIERVSSNDKRQIFQQFLNEILVSNILDHKNLVTFRGYAFHHEEFLVAHEYLSNGTLAAYLECEIQHNKCTLPLLTRMEIAIDIANALSYLHKNGIIHHNINSSNILLDKNMCAKVAGLHLSRKLPEDVSVNATSIVSISSDIAKNCVYIDPEYVSHGRVSTKNDVYSFGVVLCDLISSKLAKYWESRDGESIAVLLGRNIENQALDKVLDPRTGFQSDHKIMQVMTAMAELALNCMGFPQEQRPNMEQVLDILNGKRLERYKTIEAFRIFDFADLRKATMQFRPDRILGEGGFGSVFYGKLQDGLEVAIKRFHNMRENSLKQFMNEIEILRLLHHRNLVSLYGRSSDEHNELFLVYEYVPNGTVSRHIHGGKIEKLPWLTRLNIAIETATALAYLHDSGIIHRDVKGSNILLDENFSVKVADFGLSRSQPDYVTHVSTAPAGTNAYMDPEYFQTGRVSYRSDVYSFGVVLFELISSKPAFWRDVPHGEAVGLAKFAIIKLLNNTLKELVDPDIGYDSDKDVTEMVTAVAELAFQCIQCPKELRPSMKQVLETLEGIKKGTWGFNQIT* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2513 633 PANTHER TYROSINE KINASE FAMILY PROTEIN 26 633 - -
Ahy5g2513 633 ProSitePatterns Protein kinases ATP-binding region signature. 354 376 IPR017441 GO:0005524
Ahy5g2513 633 SUPERFAMILY Protein kinase-like (PK-like) 330 623 IPR011009 -
Ahy5g2513 633 ProSiteProfiles Protein kinase domain profile. 40 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g2513 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Ahy5g2513 633 ProSiteProfiles Protein kinase domain profile. 348 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g2513 633 SUPERFAMILY Protein kinase-like (PK-like) 17 323 IPR011009 -
Ahy5g2513 633 Pfam Protein tyrosine and serine/threonine kinase 61 318 IPR001245 GO:0004672|GO:0006468
Ahy5g2513 633 Gene3D Phosphorylase Kinase; domain 1 13 116 - -
Ahy5g2513 633 Gene3D Phosphorylase Kinase; domain 1 333 424 - -
Ahy5g2513 633 CDD STKc_IRAK 354 622 - -
Ahy5g2513 633 SMART serkin_6 348 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g2513 633 SMART serkin_6 40 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g2513 633 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 26 633 IPR044652 -
Ahy5g2513 633 Pfam Protein kinase domain 351 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g2513 633 Gene3D Transferase(Phosphotransferase) domain 1 117 332 - -
Ahy5g2513 633 Gene3D Transferase(Phosphotransferase) domain 1 425 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2513 Ahy-Chr5 100204121 100208767 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2513 335 623 Receptor kinase-like Gene Family AT1G25390 56.314 4.95e-102 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Ahy5g2513 Pkinase 4.00E-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2513 - - gsj:114418636 747.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2743 15 144447013 144449541 Ahy5g2513 5 100204121 100208767 hybridization