Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2509 ATGGATTGGCACGTCCATAGCGAACTCCCCATGGTGCTTGCATGCATAGGGACCGTCATCTCTTTGTTGCTGACAGCCGCTTTGCCACCATCCCTCTCCCAATCACCACCTTCCAATCACTCCCTCTGTAAGCATCCATATGAGTGTGGCGAATACAAATTATACTACCCTTTCTGGGGGGAAGACAGACCAGTCCAGTGTGGCGGCGACAAAAAACTCAAGCTTTCATGCGGGACGGAGAGTGGTAAATACGGCGGGGAGATCGATTACGCTTATATTGAAACGGACTCACAACGTTTCAAAGTGGTGGGAAATGATGACCCCCTAAATACTACTTTTACATTGGTGCCCTTGCCAGTCGCTGACGGAGAACATGATGTTTGCTCTATGAATTTCAATTACTCTCTGAATTACCTTCCATTCACCTATAACCAAATAGTGCACAACATCACCATATTCTATGATTGCACCTACTCTCGGGATTATCAAAGCCTAGGGTGCGGGGGTAGCGGTGGTGATGTTGTGTATTATAATGGTACGGAAAAAGAGGTGCTGGCAAGTCATCAAGAGCTTAAGGATTGCCAACATCGTATCCAAGTGGCCGCTGAGGCTGTTGAGTTGAACGGGGTCGGAGTTGATGATGCTTTTCCTCTGTATTTCGGTAAAGGTGTCTCGGTGAGCTACACTTATTCTCAAGATTGTATGAGATGCGTGGACAGTGGAGGAAGTTGCGGGAGGAACGATACGCATGCATTTACCTGCTATTGCCCTGATGGATCTATTGCCCTCCCATGTTCTCATCCTGTTCCTGCTCCTGATCCTCCTCCTGGTCCTCGTGCCAATTATCGTTCTCAAGAAAAGAGTAATGGATGGACCTGGCAAAAGAAAGTCATTATTGGTGCTACAGCAGCTGCAGTAATTGCAGGATTATTGAGTATTTGTTATTTTACCTACATGTCACCAGCATCACAAGAAAAATACTGCTTTCCAACAAAGGGTAACCAAGATATTGAAACTTTCTTAAAAAATCATGGAGTGTTAACTACAAAAAGATATAAATTCTCTGATGTGAAGAAAATGACCAACTCCTTCAAAGTTAAACTAGGACAAGGTGGTTTTGGTGTTGTATACAAGGGAAAGTTATCCAATGATTTTGATGTGGCAGTCAAAATGTTGAATCCATCCAAAGGAAATGGTGAAGAATTTATTAACGAGGTAGCTAGCATTAGTAGAACTTCTCATGTTAATGTTGTCGCCCTTCTTGGATTTTGCTTAGAAGGTCACAAGAAAGTTCTCATCTATGAATTTATGTCCAATGGTTCCCTTGACAATTTTATTTACAAAAAGAACCCTAAGAATACACCACTCTTGAGCTGGGATAATTTATATCAAATTTCCATAGGGATTGCTAGAGGATTGGAGTATTTGCACAGAGGATGCAACATTCTTATTTTACATTTTGACATAAAACCACATAATATTCTTTTGGATGAAAACTTTTGTCCTAAGATATCAGATTTTGGGCTAGCAAAACTTTGTCCTAGAAAAGAAAGTCATATTTCAGTGTCCGAAACTAGAGGAACAATAGGGTACATAGCTCCAGAAGTGTGGAGTAGACATCTCGGCAGAGTTTCACATAAATCTGATGTTTATAGCTATGGAATGATGCTTCTAGAAATGGTAGGAATGAAGGAGAACATCCTTGCAAAGACAAGTCACACAAGCGAGATGTACTTCCCTGATTGGATATACAAAAGGCTTGATCAAGGAACTCAACTGGGACCTGATGATGATGGGGAAGTGGCCATAGAGGAAGATGATGTTGTTAAGAAAATGACAATGGTGGGTTTATGGTGCATTCAACCAATTCCAAATGACAGACCAACAATGAGTAGAGTTGTAGAAATGTTGGAAGGCAGCATGAATTCCCTGGAAATGCCACCAAGACCTGTTCTGTCTTCAATAAGAGTGGCGGTAGAATCTTCTTCTAATGTTTTATCGTTGGTAGAATCTTCTTCTGTTGTATCAGTTGTAGAATCTTCTGCTAGTGTAACTTAG 2058 0.4155 MDWHVHSELPMVLACIGTVISLLLTAALPPSLSQSPPSNHSLCKHPYECGEYKLYYPFWGEDRPVQCGGDKKLKLSCGTESGKYGGEIDYAYIETDSQRFKVVGNDDPLNTTFTLVPLPVADGEHDVCSMNFNYSLNYLPFTYNQIVHNITIFYDCTYSRDYQSLGCGGSGGDVVYYNGTEKEVLASHQELKDCQHRIQVAAEAVELNGVGVDDAFPLYFGKGVSVSYTYSQDCMRCVDSGGSCGRNDTHAFTCYCPDGSIALPCSHPVPAPDPPPGPRANYRSQEKSNGWTWQKKVIIGATAAAVIAGLLSICYFTYMSPASQEKYCFPTKGNQDIETFLKNHGVLTTKRYKFSDVKKMTNSFKVKLGQGGFGVVYKGKLSNDFDVAVKMLNPSKGNGEEFINEVASISRTSHVNVVALLGFCLEGHKKVLIYEFMSNGSLDNFIYKKNPKNTPLLSWDNLYQISIGIARGLEYLHRGCNILILHFDIKPHNILLDENFCPKISDFGLAKLCPRKESHISVSETRGTIGYIAPEVWSRHLGRVSHKSDVYSYGMMLLEMVGMKENILAKTSHTSEMYFPDWIYKRLDQGTQLGPDDDGEVAIEEDDVVKKMTMVGLWCIQPIPNDRPTMSRVVEMLEGSMNSLEMPPRPVLSSIRVAVESSSNVLSLVESSSVVSVVESSASVT* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2509 685 Gene3D Transferase(Phosphotransferase) domain 1 437 646 - -
Ahy5g2509 685 Pfam Wall-associated receptor kinase C-terminal 181 259 IPR032872 -
Ahy5g2509 685 SMART serkin_6 362 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g2509 685 SUPERFAMILY Protein kinase-like (PK-like) 345 638 IPR011009 -
Ahy5g2509 685 PANTHER - 29 678 - -
Ahy5g2509 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 484 496 IPR008271 GO:0004672|GO:0006468
Ahy5g2509 685 Gene3D Phosphorylase Kinase; domain 1 337 436 - -
Ahy5g2509 685 Pfam Protein tyrosine and serine/threonine kinase 364 637 IPR001245 GO:0004672|GO:0006468
Ahy5g2509 685 ProSiteProfiles Protein kinase domain profile. 362 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g2509 685 PANTHER RUST RESISTANCE KINASE LR10-RELATED 29 678 IPR045874 GO:0004672
Ahy5g2509 685 ProSitePatterns Protein kinases ATP-binding region signature. 368 390 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2509 Ahy-Chr5 100147698 100151540 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2509 35 667 Receptor kinase-like Gene Family AT1G66910 39.334 9.18e-138 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Ahy5g2509 PK_Tyr_Ser-Thr 5.80E-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2509 - - ahf:112751085 879.782
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2746 15 144574419 144578369 Ahy5g2509 5 100147698 100151540 hybridization