Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2508 ATGAAACAAAGAACACTTTTATCCACCTTAAGTTCCTTTTATTCTTTTCCCCTTATTATTCGCTCGTACATAATAATCTTTTTCCTTCTTCTAACAAGAAGCACTGTGTGTTCTGTGAATCCAAAGTTCCAAGCATGTGAGCCCAAAACTTGTGGTGGCGATACTAATCACCAAAACATAAGCTTTCCCTTCTACATCATATCAAAACAAAACTCCTACTGTGGTCTCCCTGATTTCGGTCTCACCTGTTCTCACGATGGCTTCCCAATCGTAAATCTCGCAGGAGATCTATACACTGTCCAAAACATTTTCTACAACAACCAATCACTTCGAGTGTCCATCCCTGCGCTTTCGGGGCTAAGTACCACGGAATGTATTGCCCCGGTGAGAAACTTCACCGGCCACAGCAAAAGGTTCAGTGTTGCTTCGAAGCAGAAGCAAGTGTTGCTGTTTTATGGCTGTGAAAACATGCAAGAGCATAGTATTGGGTGTTCAGCTGAAAACAGAACAAGATCGGTTGTGGCGCTTTATGGGGATGACGTTGACAATTTGAAGTTGGCGTTGAAGAATTGCAGGGGGACGGTGAGAGTAACGAGGGTGGAAGATGAGAAAGGAGGGGTTGAAGAGGCGCTGAGAAGAGGGTTTTTGATGAATTGGACGGCCAAAAATTGCAGCGAGTGCTCGAACAGTGGTGGGAGGTGTGGGTTCGACGAAGAAGACTATGCTTTCAGGTGCCATTGTCGGGATAGAATTGACTCGGAGAGTTGTTATTCAGAACCAGGTGTGTCCATACTCCTCTCTGACTCTACCTAA 813 0.4502 MKQRTLLSTLSSFYSFPLIIRSYIIIFFLLLTRSTVCSVNPKFQACEPKTCGGDTNHQNISFPFYIISKQNSYCGLPDFGLTCSHDGFPIVNLAGDLYTVQNIFYNNQSLRVSIPALSGLSTTECIAPVRNFTGHSKRFSVASKQKQVLLFYGCENMQEHSIGCSAENRTRSVVALYGDDVDNLKLALKNCRGTVRVTRVEDEKGGVEEALRRGFLMNWTAKNCSECSNSGGRCGFDEEDYAFRCHCRDRIDSESCYSEPGVSILLSDST* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2508 270 Pfam Wall-associated receptor kinase C-terminal 182 249 IPR032872 -
Ahy5g2508 270 Pfam Wall-associated receptor kinase galacturonan-binding 46 113 IPR025287 GO:0030247
Ahy5g2508 270 PANTHER OS01G0690200 PROTEIN 19 258 - -
Ahy5g2508 270 PANTHER WALL-ASSOCIATED RECEPTOR KINASE GALACTURONAN-BINDING PROTEIN 19 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2508 Ahy-Chr5 100133335 100134147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2508 44 236 C3H Transcription Factor Family AT2G46495 25.728 1.91e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2508 - - ahf:112803863 554.288