Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2507 ATGACCAACTCTTTCAAAGATAAATTAGGACAAGGCGGTTTTGGTGCTGTATATAAGGGAAAGTTATCCAATGGTTTTGATGTGGCTGTCAAAATATTGAATCCATCCAAAGGAAATGGTGAAGAATTTATTAACGAGGTAGCTAGCATTAGTAGAACTTCTCATGTTAATGTTGTCACTCTTCTTGGATTTTGTTTTGAAGGTCATAAGAAAGTTCTCATCTATGAGTTTATGTCCAATGGTTCCCTTGACAATTTTATTTACAAAAAGGACCCTAAGAGTACTCCACTCTTGAGTTGGGATAATTTGTATCAAATTTCCATAGGGATTGCTAGAGGATTGGAGTATTTGCATAGAGGATGCAACATTCAAATTTTACATTTTGACATAAAACCACATAATATTCTTTTGGACGAAAACTTTTGTCCCAAAATATCAGATTTTGGGCTAGCAAAGCTTTGTCCTAGAAAAGAAAGTCATATTTCAATGTCTGAAACTAGAGGAACAATAGGGTACATAGCTCCAGAAGTGTCAAATAGACATTTCGGTAGAGTTTCATATAAATCTGATGTTTATAGCTATGGAATGATGCTTCTAGAAATGGTAGGAATGAAGGAGAAGAACATAACTGCAGAACCAAGTCAATCAAGCGAGATGTACTTCCCTGATTGGATATACAAAAGGCTTGAGCAAGGCAGTCAATTAGGACCAGATGATGATGGGGAGGTGATCATAGAGGAAAATGATGTTGTTAAGAAAATGACAGTGGTAGGTTTATGGTGCATTCAACCAATTCCAGATGATAGACCAACAATGAGCAAAGTTGTAGAAATGTTGGAAGGCAGCATGAATTTCCTGGAATTGCCTCCTAGGCCTGTTCTGTCTTCTCAGATAAGGTTGGTGATAGAATCTTCTACTATTGTATCGTCATTGACAGAATCTTCTTCTATTGTAAGTTAA 960 0.3635 MTNSFKDKLGQGGFGAVYKGKLSNGFDVAVKILNPSKGNGEEFINEVASISRTSHVNVVTLLGFCFEGHKKVLIYEFMSNGSLDNFIYKKDPKSTPLLSWDNLYQISIGIARGLEYLHRGCNIQILHFDIKPHNILLDENFCPKISDFGLAKLCPRKESHISMSETRGTIGYIAPEVSNRHFGRVSYKSDVYSYGMMLLEMVGMKEKNITAEPSQSSEMYFPDWIYKRLEQGSQLGPDDDGEVIIEENDVVKKMTVVGLWCIQPIPDDRPTMSKVVEMLEGSMNFLELPPRPVLSSQIRLVIESSTIVSSLTESSSIVS* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2507 319 Pfam Protein tyrosine and serine/threonine kinase 5 279 IPR001245 GO:0004672|GO:0006468
Ahy5g2507 319 ProSitePatterns Protein kinases ATP-binding region signature. 9 31 IPR017441 GO:0005524
Ahy5g2507 319 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Ahy5g2507 319 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 306 - -
Ahy5g2507 319 CDD STKc_IRAK 9 281 - -
Ahy5g2507 319 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 306 IPR045874 GO:0004672
Ahy5g2507 319 Gene3D Transferase(Phosphotransferase) domain 1 78 287 - -
Ahy5g2507 319 ProSiteProfiles Protein kinase domain profile. 3 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g2507 319 Gene3D Phosphorylase Kinase; domain 1 1 77 - -
Ahy5g2507 319 SMART serkin_6 3 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g2507 319 PIRSF ILK 3 286 - -
Ahy5g2507 319 SUPERFAMILY Protein kinase-like (PK-like) 5 280 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2507 Ahy-Chr5 100128067 100129375 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2507 1 317 Receptor kinase-like Gene Family AT1G66910 57.453 1.95e-126 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Ahy5g2507 PK_Tyr_Ser-Thr 2.20E-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2507 - - ahf:112751085 533.102