Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2506 ATGTTTACTTTTACAGTGGCAGGCAATCGTTGGCAATGGAAATTAAGGCATATCATAGTAGGTTTTATAGCCATAGTGATTCCAGGATTAGTGTTGATATATATCTGTACAGTTTGTTGCTTAAGATACAAATCATCAAGCTGGGAAGAAGTATTTTGGTTCACAACGAAAAGTAACCAAGATATTGAAGCAATCTTAAAAAGTCATGGAGCACTAAGTCTCAAAAGATATAAATTCTGCGATGTGAAGAAAATGACTAGCTTCTTCAAAGTTAAACTTGGACAAGGTGGTTTTGGTACTGTATACAAAGGAAAGCTACTAAATGGTTCTGATGTGGCTGTAAAAATATTGAATCTCTCCAAAGGAAAGGATAAAGAATTTATCAATGAAGTAGCTAGCATTAGCAAAACATCTCACATAAATATTGTTACCCTTTTTGGGTTTTGCTTAGAAGGTAACAAAAGAGCACTTATTTATGAGTTTATGTCTAATGGTTCTCTTGATACATTTATTTACAAAAAGGGACACTATGAAGGCACTCCATCCTTGAATTGGGATCAGTTATATCAAATTGCAATAGGAATAGCTAAAGGGCTAGAGTATTTGCATAAAGAATGTAACATTCGAATTTTTCATTTTGACATAAAGCCGCATAATATTCTTTTGGATGAAAACTTTTGCCCTAAGATATCAGATTTTGGGCTAGCAAAACTCAGTCTTAGAAGTGATGACAGTGTCATTTCCATGTCTGATGCTAGAGGAACCATGGGATATGTGGCTCCAGAAATGTGGAATAAACATCTTGGTGGAATTTCTCATAGATCAGATGTTTATAGTTATGGAATGATGCTACTAGAAATTGTGGGCGGAAGAAAGAACATTCATGCAGAAGCAAATCACACAAGTGAGATATATTTTCCTTATTGGATACACAAAAGGCTTGAACAAGGCACTCAATTGGGCAATAACGAAAACATTGGCATTGCAGAAAATGATATTGTCAAAAGAATGACTATAGTGGGTTTATGGTGCATTCAAACGTTGCCAAATGATAGGCCATCAATAAGTAGAGTTATAGATATGTTGGAAGGCAGCATGGAATCTTTGGAACTTCCACCTAAACCAATTCTATCTGCTGCATGA 1143 0.3517 MFTFTVAGNRWQWKLRHIIVGFIAIVIPGLVLIYICTVCCLRYKSSSWEEVFWFTTKSNQDIEAILKSHGALSLKRYKFCDVKKMTSFFKVKLGQGGFGTVYKGKLLNGSDVAVKILNLSKGKDKEFINEVASISKTSHINIVTLFGFCLEGNKRALIYEFMSNGSLDTFIYKKGHYEGTPSLNWDQLYQIAIGIAKGLEYLHKECNIRIFHFDIKPHNILLDENFCPKISDFGLAKLSLRSDDSVISMSDARGTMGYVAPEMWNKHLGGISHRSDVYSYGMMLLEIVGGRKNIHAEANHTSEIYFPYWIHKRLEQGTQLGNNENIGIAENDIVKRMTIVGLWCIQTLPNDRPSISRVIDMLEGSMESLELPPKPILSAA* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2506 380 Gene3D Transferase(Phosphotransferase) domain 1 162 371 - -
Ahy5g2506 380 ProSiteProfiles Protein kinase domain profile. 87 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g2506 380 SUPERFAMILY Protein kinase-like (PK-like) 76 363 IPR011009 -
Ahy5g2506 380 PANTHER RUST RESISTANCE KINASE LR10-RELATED 8 377 IPR045874 GO:0004672
Ahy5g2506 380 Gene3D Phosphorylase Kinase; domain 1 52 161 - -
Ahy5g2506 380 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 8 377 - -
Ahy5g2506 380 SMART serkin_6 87 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g2506 380 Pfam Protein tyrosine and serine/threonine kinase 90 361 IPR001245 GO:0004672|GO:0006468
Ahy5g2506 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Ahy5g2506 380 ProSitePatterns Protein kinases ATP-binding region signature. 93 115 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2506 Ahy-Chr5 100122425 100124950 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2506 58 378 Receptor kinase-like Gene Family AT4G18250 54.711 7.01e-119 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Ahy5g2506 PK_Tyr_Ser-Thr 1.30E-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2506 - - gmx:102665158 509.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2748 15 144648098 144651125 Ahy5g2506 5 100122425 100124950 hybridization