Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2504 ATGCATATGCGGCATATATATACGCTGCTTACCATCTCTTTGTGGTTGTTATTGCTAACAGCTTTGCCGCCATGCCTGTCTCAACTTTGTAGCCAGCAGCCATACAAGTGCGGAGGACTGCCTGACCTATACTACCCATTTTGGGGAAATACCCGGCCCTCTTACTGTGGCGGCGGCCACCAATTCAACCTAACCTGCTACAACTCCGACCACACATTCATTTCAATGGGGTCACAACAATTCGAAGTGGTGGACATTGACACCCAAGCTCACATCATGACAATGGTGCCGAAAGAGTATGATGTTTGCTCTCCCCGCTTGGACTTTTCCCTCAGTCCCCTCTTCTGGTACGCCAAAACTGTCCACAACATCACCATATTCTACGATTGTCCCTCGGAGGTAGTTTCTTCTGTGAACAACTTTACCTGCGGAGCGGAGAATAATCAGACTGATGGTGTATACTATGTTGGTGGGGAAGATGAGTTGTTGCAACAGAATGTAGAGCTACGGAAATGCCAGCGGCGAAAGCAAGTTCCGGCGGACGAGAGCGCTCCTTCCCCTGATGGTGGTGTGAATGCTCTGTATGCAGCTTTAGAGGTGGGGTTTCAGGTCAACTATGTGGTTTCTAAGGAGTGCATGACATGCCTCGCAACTGATGGTGTTTGTGGCAGATTTGATGATGATAATTTCATCTGCTCTCGTCGAAAAAGTAATGCGTTGCACGGGAAAATGCCAGTTATCATTGGTGTTACGGGTAGTGTGGCTGGACTAATATTAATATGCATCACTATTTGGTGCTTGTTGAAATTATTCAAGTCATCTAGATGGCAAGAAAGATTTTGGTTAAGGACTAATAGGAACCAAGATATTGAGGCCTTCTTAAAAAGTCATGGAGCTCTAACGTTAAAGAGATATAAATTCTCAGCATTGAAGAAACTCACCAACTCCTTCAAATGTAAATTGGGTAAAGGAGGTTTTGGTGTTGTGTACAAAGGATTGTTACCCAACGGATGTCCAGTGGCTATAAAGATTTTGAACCCATCCAAAGGAAACAATGAAGAATTTATTAACGAGGTAGCTAGCATCAGTAAAACTTCTCATGTTAACGTTGTCACTCTTCTTGGATTTTGTTTAGAAGGTTACAAAAAGGCTCTCATCTATGAATTTATGTTTAATGGTTCTTTAGAAAAGTTTATTTGCACTAATAATAGAATACCAATTGCTCCATCGTTAAGTTGGAGCAAATTGTATCAAATTGCAATAGGAGTAGCGAGAGGGTTAGAGTACTTACACAAAGGATGCAATACTCGAATCTTACATCTTGACATAAAGCCACATAATATTCTTTTAGACGAGAATTTTTGTCCTAAGATATCAGATTTTGGATTATCAAAATTGTGCCTCAAGAAAGAAAGTATTATTTCCATATCAGATGCTCGAGGAACAATAGGATATATAGCTCCAGAAGTGTGGAATAAAAATTTTGGTGGAATTTCTTACAAATCTGATGTTTATAGCTACGGAATGATGCTACTAGAAATAGTTGGAGGAAGGAAGAAGAGTGACAATGCAGAAGGCTCAAGTAGTGAATATTTTCCAGACTGGGTATATAGAAGGCTTAAGGAAGTAACTCATGGGGAGGTAGCCACAGAAGAAAATGTGATCATTAGAAGAATGACTATGGTAGGTCTATGGTGCATTCAAAGTATTCCAAGTGATAGACCGACAATGAATAAAGTGTTAGATATGTTGGAAGGCAATATTGATACCATAGGAATCCCTCCAAAACTTGTTGTGTCTTCTCCAGTTAGATCAGAGTGA 1821 0.4086 MHMRHIYTLLTISLWLLLLTALPPCLSQLCSQQPYKCGGLPDLYYPFWGNTRPSYCGGGHQFNLTCYNSDHTFISMGSQQFEVVDIDTQAHIMTMVPKEYDVCSPRLDFSLSPLFWYAKTVHNITIFYDCPSEVVSSVNNFTCGAENNQTDGVYYVGGEDELLQQNVELRKCQRRKQVPADESAPSPDGGVNALYAALEVGFQVNYVVSKECMTCLATDGVCGRFDDDNFICSRRKSNALHGKMPVIIGVTGSVAGLILICITIWCLLKLFKSSRWQERFWLRTNRNQDIEAFLKSHGALTLKRYKFSALKKLTNSFKCKLGKGGFGVVYKGLLPNGCPVAIKILNPSKGNNEEFINEVASISKTSHVNVVTLLGFCLEGYKKALIYEFMFNGSLEKFICTNNRIPIAPSLSWSKLYQIAIGVARGLEYLHKGCNTRILHLDIKPHNILLDENFCPKISDFGLSKLCLKKESIISISDARGTIGYIAPEVWNKNFGGISYKSDVYSYGMMLLEIVGGRKKSDNAEGSSSEYFPDWVYRRLKEVTHGEVATEENVIIRRMTMVGLWCIQSIPSDRPTMNKVLDMLEGNIDTIGIPPKLVVSSPVRSE* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2504 606 Pfam Protein tyrosine and serine/threonine kinase 317 583 IPR001245 GO:0004672|GO:0006468
Ahy5g2504 606 Gene3D Transferase(Phosphotransferase) domain 1 390 591 - -
Ahy5g2504 606 Pfam Wall-associated receptor kinase C-terminal 162 232 IPR032872 -
Ahy5g2504 606 SUPERFAMILY Protein kinase-like (PK-like) 301 585 IPR011009 -
Ahy5g2504 606 SMART serkin_6 315 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g2504 606 Gene3D Phosphorylase Kinase; domain 1 278 389 - -
Ahy5g2504 606 Pfam Wall-associated receptor kinase galacturonan-binding 30 95 IPR025287 GO:0030247
Ahy5g2504 606 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE, PROTEIN KINASE RLK-PELLE-LRK10L-2 FAMILY-RELATED 10 605 - -
Ahy5g2504 606 ProSiteProfiles Protein kinase domain profile. 315 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g2504 606 ProSitePatterns Protein kinases ATP-binding region signature. 321 343 IPR017441 GO:0005524
Ahy5g2504 606 PANTHER RUST RESISTANCE KINASE LR10-RELATED 10 605 IPR045874 GO:0004672
Ahy5g2504 606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 438 450 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2504 Ahy-Chr5 100094314 100098118 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2504 14 599 Receptor kinase-like Gene Family AT1G66910 40.625 1.11e-142 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Ahy5g2504 PK_Tyr_Ser-Thr 1.60E-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2504 - - gmx:106794113 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2751 15 144726204 144730009 Ahy5g2504 5 100094314 100098118 hybridization