Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy5g2502 | ATGTTAGAACCTTTCTACTTGTTATGTGCATTATTCTCCGCCATATTCATGACATGTTATGCTGATTCATCACCAATTTGTGCTCCTTCTGATTGTGGTAATGAAGTTCCCATTAAGTACCCTTTCTGGAAACGTTCCGGCACCGTCGGAGAAGTTTGCGGTTATCCGGAGTTTGGTCTTGAATGTTCAAAAAAAGGCTACCCTATCCTCCAACTGAAAACTGACACATACTATGTTACAGACATAAACTATGTAAATCATTCAATCACACTTGTTGACATTGATGTGATGAATGATACATGTCCAAGGGCAAAGAACAACGTTTCCATAGGGAACATACCTTTGTCTTTCAGTAATTTGGATATGAACATCACTTTCTACTTCAATTGCAGTTCTCAGCCTTCAGTGGTTGGTGCCGTGCCTATCAAGTGTTTGATAAATGGTCAGGGGAAGAAGTCTTATGTGTTTGAGGTTGGAACGGATATTGGTCGAAGGACTTGGACTAACTCTTGTGATGCTGAGGTTATGGTGGCAGTGAAGCATGATCAGATCAATAGTGGTGACTTGATCAATGAGTTTGGTGCAGCTATGAGCAAAGGGTTTGTTCTTGATTGGAACAGAGCTGTGGATTGTGCTGAGTGCGAGCTTTCTGATGGGTATTGTGCATATAATGGAACTACTAGGCAGACCATGTGCATATGCAAAGATAGCATAATTGTTGCCGAAAGCTGTAAAAAAGCTGCAGGTAATCGCTGGACCAGACTAAAGAAAGTCATTATTGGTGCTACAACAGCTGCAGTAATTGCAGGATTGTTGAGTATTTGTTACTTTACATACAAGTTACCAAGATGGCGAGAAAAATATAGCTTTCTGACAAAAGGTAACCAAGATATTGAAACTTTCTTAAAAAATCATGGCGTGTTAAGTATAAAACGATATAAATTCTCTGATGTGAAGAAAATGACCAACTCCTTCAAAGTTAAACTAGGACAAGGTGGTTTTGGTGTTGTATACAAGGGAAAGTTATCCGATGGTTCTAATGTGGCAGTCAAAATGTTGAATCCATCCAAAGGAAATGGTAAAGAGTTTATCAATGAAGTAGCTAGCATTAGTAGAACTTCTCATGTTAATGTTGTCACCCTTTTTGGATTCTGCTTTGAAGGCCGCAAGAAAGTTCTTATTTATGAATTTATATCAAATGGTTCCCTTGACAAGTATATTTATAGAAAGGAAGGAGTTGAAACTACTACATTGTTGAGTTGGGATAAGCTGTATCAAATTGCCAAAGGGATAGCTAGGGGGTTAGAATACTTGCATAGAGGATGCAACACTCAAATTTTACATTTTGACATAAAGCCACATAATATTCTTTTGGATGAAAATTTTTGTCCTAAGATATCAGATTTTGGACTAGCAAAACTTTGTCCTGGGAAGGAAAGTCTTATTTCCATGTCAGATGCTAGAGGAACAATAGGGTATATAGCTCCAGAAGTATGGAATAGACATTTCGGCAAAGCTTCTCATAAATCTGATGTTTATAGTTATGGAATGATGCTTCTTGATATAGTGGGAGGAAAGAAGAACATTAATGTAGAAGGGAGTCAAACAAGTGAGATATATTTCCCTGATTGGATATACAAAAGGCTTGAACAAGGCACTCAATTAGGACCTGAAGATGGAGTGGTGGCAATAGAGGAAAATGAATTGGTTAAGAAAATGACGATTGTGGGTTTATGGTGTATTCAAACAATTCCAAATGATAGACCTACAATGAGTAAAGTTGTAGAAATGTTAGAAGGCAGCATAGATTCCATAAAAATGCCACCAAGACCTGCTCTGTCTTCTCCTGTAAGATCGATTGCAGAATCTTCTACTTTGTTAAATTAG | 1887 | 0.3778 | MLEPFYLLCALFSAIFMTCYADSSPICAPSDCGNEVPIKYPFWKRSGTVGEVCGYPEFGLECSKKGYPILQLKTDTYYVTDINYVNHSITLVDIDVMNDTCPRAKNNVSIGNIPLSFSNLDMNITFYFNCSSQPSVVGAVPIKCLINGQGKKSYVFEVGTDIGRRTWTNSCDAEVMVAVKHDQINSGDLINEFGAAMSKGFVLDWNRAVDCAECELSDGYCAYNGTTRQTMCICKDSIIVAESCKKAAGNRWTRLKKVIIGATTAAVIAGLLSICYFTYKLPRWREKYSFLTKGNQDIETFLKNHGVLSIKRYKFSDVKKMTNSFKVKLGQGGFGVVYKGKLSDGSNVAVKMLNPSKGNGKEFINEVASISRTSHVNVVTLFGFCFEGRKKVLIYEFISNGSLDKYIYRKEGVETTTLLSWDKLYQIAKGIARGLEYLHRGCNTQILHFDIKPHNILLDENFCPKISDFGLAKLCPGKESLISMSDARGTIGYIAPEVWNRHFGKASHKSDVYSYGMMLLDIVGGKKNINVEGSQTSEIYFPDWIYKRLEQGTQLGPEDGVVAIEENELVKKMTIVGLWCIQTIPNDRPTMSKVVEMLEGSIDSIKMPPRPALSSPVRSIAESSTLLN* | 629 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy5g2502 | 628 | SUPERFAMILY | Protein kinase-like (PK-like) | 304 | 599 | IPR011009 | - | |
Ahy5g2502 | 628 | ProSitePatterns | Protein kinases ATP-binding region signature. | 329 | 351 | IPR017441 | GO:0005524 | |
Ahy5g2502 | 628 | MobiDBLite | consensus disorder prediction | 609 | 628 | - | - | |
Ahy5g2502 | 628 | ProSiteProfiles | Protein kinase domain profile. | 323 | 613 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ahy5g2502 | 628 | Pfam | Wall-associated receptor kinase galacturonan-binding | 27 | 93 | IPR025287 | GO:0030247 | |
Ahy5g2502 | 628 | Pfam | Wall-associated receptor kinase C-terminal | 144 | 236 | IPR032872 | - | |
Ahy5g2502 | 628 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 446 | 458 | IPR008271 | GO:0004672|GO:0006468 | |
Ahy5g2502 | 628 | Gene3D | Transferase(Phosphotransferase) domain 1 | 398 | 612 | - | - | |
Ahy5g2502 | 628 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 30 | 625 | IPR045874 | GO:0004672 | |
Ahy5g2502 | 628 | PANTHER | - | 30 | 625 | - | - | |
Ahy5g2502 | 628 | Pfam | Protein kinase domain | 326 | 596 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ahy5g2502 | 628 | SMART | serkin_6 | 323 | 598 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ahy5g2502 | 628 | CDD | STKc_IRAK | 329 | 600 | - | - | |
Ahy5g2502 | 628 | Gene3D | Phosphorylase Kinase; domain 1 | 297 | 397 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy5g2502 | Ahy-Chr5 | 100046221 | 100049954 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy5g2502 | 27 | 626 | Receptor kinase-like Gene Family | AT5G38260 | 40.097 | 2.00e-148 | 442 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Ahy5g2502 | Pkinase | 5.90E-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy5g2502 | - | - | gmx:100796618 | 739.184 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy15g2754 | 15 | 144768332 | 144771506 | Ahy5g2502 | 5 | 100046221 | 100049954 | hybridization | |
Ahy5g2502 | 5 | 100046221 | 100049954 | Ahy13g2131 | 13 | 39829581 | 39833120 | PCT | |
Ahy5g2502 | 5 | 100046221 | 100049954 | Ahy3g1835 | 3 | 37882638 | 37886205 | PCT |