Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2499 ATGGCGGCGAAAAGGTTTTTGGATGATTCTGATGATCGAGACCAAGATAAGCCAAACGACAAACGGTTTAGATCTAATAGACCTACTTTGGCTTCGGTAATAACCGAAGTTGTTATGGTGAAAAACTTGCAAACCTTGTTTACCGTAGCCTTGGAACCTGTGCTCAAGAGAGTGGTGAGTGAAGAGGTTGATAGAGCGATGAGGCAATGGTGTTCTTGTTCTTCGTCAAGGTCCTTAACAAGGTCACCATCATTGAGAATCAAAGCATTTGACGATGATCAACCATCATCAACCTTGCAACTAGTCTTCAGCAAGAGGCTATCCCTTCCAATCTTCACCGGAAGCCGAATCCTCGATGTCGAAGGCAACCCTATAAGCATACTTCTCATGGACAAGAGCAGTGGCCAGATGGTTCCAACAAGCCTCCCACATCCAATCAAGCTCGAACTCCTCGTGCTCGACGGCGATTTCCCCCTTTCTGATAATGACAACTCTTCTTCATCTTCTTCATCTTCTCGTGGTTGGAGTAGTGAAGAATTCAATAGCCGCATAGTGAAGGAGAGAACTGGCAAGAGACCTTTGCTTGCCGGAGAGTTGAACCTCACCATGAGGGATGGCATTGCACCAACTGGGGACATTGAGTTCACCGATAATAGTAGCTGGATTCGCAGCCGGAAGTTCCGGGTTGCCGTTAGGGTGGCTCCGGGGACTAACCACCATTCTCTTGCAATTCGAGAAGGCATTACTGAAGCTTTTGTTGTCAAGGATCACCGTGGAGAATTGTACAAAAAACATCACCCACCAATGCTAAATGACGAAGTGTGGCGGCTAGAAAAGATTGGAAAAGATGGAGCTTTCCACAAAAAATTGAGTTCAGAAGGGATCAAAACAGTTCAAGACTTTCTCAAACTATCAGTTATTGATCCTCATAGGCTAAGAAAGATTTTGGGCATTGGGATGTCAGATAAAATGTGGGAAGTGACAATCAAGCATGCAAAGACTTGTGAAATGGGAAGCAAGATCTACATCTACCGTGGCCCTCATTTCACTCTTTTTCTTAATCCAATTTGCCAATTGATTAAAGCTGATGTCAATGGCCACACATTTCCTACCAAAGAGCTTACCAATTTGAATAGGGCTTATATAGAGAAGTTGGTGAGAGAAGCATACGCTAAATGGCAAAACTTGGAGGAATTTGATGGGGTTTTGAATGATAACATTGCTTTGTTAACCCAAGGTGATGCAAATATGGAGCAATATCAAAATAATCATCCAGGTTCGGTGGTAACATATGATAGCAACGATTATTATGGTGACAAATCCACTGCCAGCTATGTACCGAGTAATAACATCAATGATAATAGTGCACTAATAATGGGGTCCATGGAGTGGTCCCTGAATAATAGTAACCCAGGATACACCACAGCATCATTCACCAATGGATTTCCCTATGGATTTTCATCAGGATCTCAATCGGACGGTGATATAACACCTACTTCAGGTTGTGTCATTGACGAGGCTCCAAGAAGACATATTTAG 1539 0.4327 MAAKRFLDDSDDRDQDKPNDKRFRSNRPTLASVITEVVMVKNLQTLFTVALEPVLKRVVSEEVDRAMRQWCSCSSSRSLTRSPSLRIKAFDDDQPSSTLQLVFSKRLSLPIFTGSRILDVEGNPISILLMDKSSGQMVPTSLPHPIKLELLVLDGDFPLSDNDNSSSSSSSSRGWSSEEFNSRIVKERTGKRPLLAGELNLTMRDGIAPTGDIEFTDNSSWIRSRKFRVAVRVAPGTNHHSLAIREGITEAFVVKDHRGELYKKHHPPMLNDEVWRLEKIGKDGAFHKKLSSEGIKTVQDFLKLSVIDPHRLRKILGIGMSDKMWEVTIKHAKTCEMGSKIYIYRGPHFTLFLNPICQLIKADVNGHTFPTKELTNLNRAYIEKLVREAYAKWQNLEEFDGVLNDNIALLTQGDANMEQYQNNHPGSVVTYDSNDYYGDKSTASYVPSNNINDNSALIMGSMEWSLNNSNPGYTTASFTNGFPYGFSSGSQSDGDITPTSGCVIDEAPRRHI* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2499 512 MobiDBLite consensus disorder prediction 1 24 - -
Ahy5g2499 512 Pfam Calmodulin binding protein C-terminal domain 340 399 IPR046829 -
Ahy5g2499 512 Pfam Calmodulin binding protein-like N-terminal domain 99 257 IPR046831 -
Ahy5g2499 512 MobiDBLite consensus disorder prediction 489 512 - -
Ahy5g2499 512 PANTHER OS02G0177800 PROTEIN 1 504 IPR012416 GO:0005516
Ahy5g2499 512 Pfam Calmodulin binding protein central domain 269 335 IPR046830 -
Ahy5g2499 512 PANTHER PROTEIN, PUTATIVE-RELATED 1 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2499 Ahy-Chr5 99999036 100003791 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2499 3 401 Calmodulin-binding Proteins AT5G57580 47.264 6.95e-114 349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2761 15 144955988 144961045 Ahy5g2499 5 99999036 100003791 hybridization
Ahy13g2130 13 39807442 39809789 Ahy5g2499 5 99999036 100003791 PCT
Ahy3g1834 3 37863757 37866087 Ahy5g2499 5 99999036 100003791 PCT
Ahy5g2499 5 99999036 100003791 Ahy13g2130 13 39807442 39809789 PCT
Ahy5g2499 5 99999036 100003791 Ahy3g1834 3 37863757 37866087 PCT