Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2486 ATGTACACTTTCAGGAAGAAGATCCACAAAGATAAGGATGTTGAGCCAACTGAATTCGAAGAGTCTATTGGACAGGCTTTGTTTGATCTTGAAAATACCAATACGGAGCTGAAAAGCGAACTGAAAGATTTATACATAAATTCAGCTGTTCAAGTTGATGTGTCTGGGGGTCGAAAGGCTGTTGTTATCCACGTTCCCTTCAGATTAAGGAAAGGTTTCCGGAAGATTCATGTTAGACTTGTTAGAGAGCTTGAGAAGAAGTTCAGTGGCAAGGATGTAGTGTTGATTGCCACCCGTAGGATAGTGAGGCCGCCAAAGAAAGGATCTGCAGTTCAGCGCCCTCGCAACCGTACACTCACTGCTGTGCATGAGGCAATGCTTGAGGATATTGTATTGCCGGCTGAGATCGTTGGGAAGCGTGTTAGGTATCGTGTTGATGGGTCGACAATCATGAAGGTTTTCTTGGATCCCAAGGAACGAAACAACACTGAGTACAAGTTGGAGACTTTTGCTGCAGTATACAGGAAACTTTCAGGCAAAGATGTGGTGTTTGATTACCCTGCACAAGAGGCTTAG 576 0.4444 MYTFRKKIHKDKDVEPTEFEESIGQALFDLENTNTELKSELKDLYINSAVQVDVSGGRKAVVIHVPFRLRKGFRKIHVRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRNRTLTAVHEAMLEDIVLPAEIVGKRVRYRVDGSTIMKVFLDPKERNNTEYKLETFAAVYRKLSGKDVVFDYPAQEA* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2486 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Ahy5g2486 191 Coils Coil 27 47 - -
Ahy5g2486 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 190 - -
Ahy5g2486 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 190 IPR000554 GO:0003735|GO:0005840|GO:0006412
Ahy5g2486 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2486 Ahy-Chr5 99730565 99732913 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2486 1 191 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 79.058 3.86e-112 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2486 K02993 - gmx:100527642 351.288