Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2466 ATGAAGCCCCAATCTGAAAACCACTCTACAGAACCCAGGAATCTGGGCCACTCTTCAAGTGCCAACTTCAATGGAATCAATTTTGGTGAAGTTGAAGCCAAGCACCGAATGCTTTTGGTCCAGTGGCTAAATAGTCTTCTTCCAACGTTGAACTTGCCGGTAAATATCACAGATGATGAGCTAAGAGTATGCTTGAACAATGGTACAATTTTATGTCAAATAATGAACAAGCTACGACCTGGTTCAGTAAGTGAGGTCAGTGAATTTGATAATTCTCCGTCAGCAAAGTCAGAGAATGTTAAGAGATTCCTGAAAGCCATAGATGCATTGGGCATGCCCAAGTTTGAAATATCAGACCTAGAGAAGGGCCATATGAAGTCTGTTGTGGATTGTCTTTTAACACTTAGAGCCAAAAGTTTACAGAATGCTTGGGGAGACAATATTTCTATGACTAATTCCAAAGTCAGATCCATCATGAGTTCACCTTCATCACATGGGGGTGACCAGAGGAAGAATCCATCAGAATCAAAGTTCCAAAGTGTTTTGCGTAGTCCGGTAATGGCTGAGCCATCGGCTGCATTATTACACCATGTAGGTCATAAATTTCACGAGGTGTTTCAAATGAAACATGGAAGCTATGCTGAACTTCCTGCTGCCAAAATCTCAGAACTGATGAAATCTACCAGTTTAAATAATGCTCCTACTCAATCACTTTTGAGTGTTGTGAACGCTATTTTGGAAGAAAGTGTTGAAAGAAGAAATAGTGAAATACCCCATCGCGTGGCTGTCTTGTTGAGAAAAGTTGTCCAGGAGATTGAGCGGCGCATATCGACTCAAGCAGATCATTTAAAAACACAAAACAATCTTTTTAAGGCTCGCGAAGAAAAGTATCAATCAAGAATTAGAGTACTTGAGGTTCTTGCTTCTGGAGCAAGGGAAGACAATGAGGTTGGGGTTCGAAGCCCTATTCGGCAACAGCAACAGACTGCAGTTACGAGTGCAATCGTGCAGCCAAAGGAACAGAGTGAGGTGACTAAAATGGAAGAAAAGAAGGCTTTTGAATCAATACAGTCTGAAAAGGCTAAAGAGGAGACAAAGTCGGAAGATAACCAAGAGGTAATTCGGTTGATGAAAGAGCTGGAAAATAAAAACATGGACATTTCAAAATTGAAGCAAGAGCTCGAAATAATGAAGAAAGGTAGCCAAGATGTTACTAGCTCTGTGAAAGAGATGGAAGATAAAAACATGGAAATTTCGACATTGAAGAAAGAGCTAGAAACAATGAAGAAAGGCAACCAAGACCTTACTAAGGTTGTGGAAGAGATGGAAAATAAAAGGTTGGAATTTTCGGCTTTGAAACAAGAAGTAGGAATAATAAAGAGTGATGACGAGGATGTTGCTAGGTTGACAAAAGATCTGGAAAGCAAAAAAATAGAAATTGCAACGATGAAGCAAGAACTAGAAGCATTGAGAAAAGGAAATCAAGATGTTGCTGGGCTGATGAAAGATTTGGAAAATAAAAGCACAGAAATTTCAACATTGAAGCAAGAAATAGAAACATTGAAAAAAGGTAACCAAGATGTTGCTAGGCTGATGAATGATCTAGAAAATAAAAAAGCAGAAATTTCAACAAAGAAGCAAGAATTAGAAAACACAATGAAAAATGGTAACCAAGATATTGCTAGGCTGATGAAGGATCTGGAAAATAAAAGCCTGGAGATTTCAGCATTGAAGCAAGAAATAGAGACACTGAAAAAAGATAACCAAGATGTTGCTAGGATGATGAAGGATCTGGAAAATAAAAGCATGGAGATTTCAACATTGAAGCAAGAAATAGAAACATTGAAAAAAGATAACCAAGATGTTAGTAGGCTGATGAAGGATCTAGAAAATAAAAACACTGAAATTTCAACAAGGAAGCAAGAACTAGAAGACACATTGAAAAATGGTAACCAAGATATTGCTAAGCTGATGACAGATCTGGAAAATAAAAGAACAGAAATTTCGGCATCGAAGCAAGAAATAGAAACATTGAAAAAAGATAATCAAGATGTTACTAAGCTTGTGAAGGACCTAGAAAATAAAAATTCAGAACTTTCAACAAAGAAACGAGAATTAGAAGAAACGCTGAAAAATGGTAACCAAGATATTGCTAAGCTGAAGAAAGATCTTGAGAATAAAACCATGGAAATTTCAGCATTGAAACAAGAAATAGAAACATTGAAAAAAGATAATCAAGATGTTACTAAACAGGTGAATGATCTAGAAAAGAAAAATGCAGAACTTTCGACAAAGAAGCAAGAATTAGAAGAGGCATTGAAAAATAGTAACCAAGATATTGCTAGGCTGACGAAAGATCTAGAAACAACAAAGAAAACATATGATTTACAGTGCTCACAGTTGGAAGCAGAAATCAAGGGTGCTAAAGGAGAACTGAAAGAGAAGTCACAAGAATATGAGCATCAGTTGGAATCATTAAGTAATAAGATTAGAGAGAATGAGGCCTCTTATGAGTCCGAATATCAAAAGTGGAACCTAAAAGTTATCCAATTTCAGAAAGCTACAACTTTTCAGCTTAGTTCGATCAAGGTCTTGAAATTGTCTTGGGAAACTGTTAAGCAGCATGTGCTAAATGAGCAACCATTTTATGCAGAAGAGTTTAAGCGATTAGGTGTAAATCTTAAACCATTGGTAGATGCAGCTGAGAACTATCAGGTAGTTCTTGCGGAAAATCGGAAGATGTTCAATGACATTCAAGAATTAAAAGGAAATATTAGAGTGTATTGCAGAGTTAGACCATTTCTCCCAGGACAAAAGGAGAAACAATCTATTGTGGAACACTATGGTGAAACCGAGTTGGTTGTGGCAAATCCTTCCAAACAAGGGAAAGAAGCCCTTAGAACATTTAAGTTTAACAAGGTCTTTGGTCCAACTGCAACTCAAGTTGATGTATACAATGACATTCAAGCCTTTATAAGATCAGTACTCGACGGGTACAACGTATGCATATTTGCTTATGGCCAAACTGGTTCTGGGAAAACTTACACAATGAGTGGTCCAAATGGTGCAACAGCTGAGAGTGTTGGTGTTAACTATCGAGCTTTGAATGACCTTTTCAGCATAGCAACTACCAGACAGAGCACCATTTCCTATGAAATTGGGGTTCAAGTGATTGAAATATACAATGAACAAGTGCGAGATCTGTTGACGTCTGAATCTACTCCAAAAAAAACGGTTGGGATATTGACTCACTCCCAACCAAATGGCTTAGCAGTACCTGATGCTAGCATGCAACTTGTAAAATCAACCGCGGATGTCATAAAGCTGATGGACATTGGCCTGAAAAATAGAGCCAAAAGTGCAACTTCTATGAATGAAAGAAGTAGCCGTTCTCACAGTGTGGTATCGATTAATGTTCGTGGAGTAGACATGAAGTCTGGTTCTACTCTTCAAGGCAACCTTCATTTGGTTGATTTGGCTGGAAGTGAGAGGGTAGATCGGTCTGAAGTGACTGGTGATCGACTTAAGGAAGCACAGCATATCAACAAATCACTATCTGCTCTTGGAGATGTCATCTTTGCTCTTGCTCAAAAGAATGCTCATGTGCCATACAGAAATAGCAAGCTTACTCAACTTCTGCAATCTTCCCTTGGTGGTCATGCAAAGACACTCATGTTGGTACAAATCAATTCAGATGTAAAGTCATATTCGGAATCTCTAAGTACCTTGAAGTTTGCTGAGAGAGTTTCTGGTATTGAGTTAGGAGCTGCAAAAAGTACCAAAGATGGGAAAGATGTCAGAGAATTAATGGAGCAGGTGGCTTCTCTAAGGGACACTATTTTGTCAAAAGATGAGGAGATTGAGAGGCTGCAATTACTTAAAGATCTGAAATCTGACAAGCCTACCCCAGAATAG 3915 0.3821 MKPQSENHSTEPRNLGHSSSANFNGINFGEVEAKHRMLLVQWLNSLLPTLNLPVNITDDELRVCLNNGTILCQIMNKLRPGSVSEVSEFDNSPSAKSENVKRFLKAIDALGMPKFEISDLEKGHMKSVVDCLLTLRAKSLQNAWGDNISMTNSKVRSIMSSPSSHGGDQRKNPSESKFQSVLRSPVMAEPSAALLHHVGHKFHEVFQMKHGSYAELPAAKISELMKSTSLNNAPTQSLLSVVNAILEESVERRNSEIPHRVAVLLRKVVQEIERRISTQADHLKTQNNLFKAREEKYQSRIRVLEVLASGAREDNEVGVRSPIRQQQQTAVTSAIVQPKEQSEVTKMEEKKAFESIQSEKAKEETKSEDNQEVIRLMKELENKNMDISKLKQELEIMKKGSQDVTSSVKEMEDKNMEISTLKKELETMKKGNQDLTKVVEEMENKRLEFSALKQEVGIIKSDDEDVARLTKDLESKKIEIATMKQELEALRKGNQDVAGLMKDLENKSTEISTLKQEIETLKKGNQDVARLMNDLENKKAEISTKKQELENTMKNGNQDIARLMKDLENKSLEISALKQEIETLKKDNQDVARMMKDLENKSMEISTLKQEIETLKKDNQDVSRLMKDLENKNTEISTRKQELEDTLKNGNQDIAKLMTDLENKRTEISASKQEIETLKKDNQDVTKLVKDLENKNSELSTKKRELEETLKNGNQDIAKLKKDLENKTMEISALKQEIETLKKDNQDVTKQVNDLEKKNAELSTKKQELEEALKNSNQDIARLTKDLETTKKTYDLQCSQLEAEIKGAKGELKEKSQEYEHQLESLSNKIRENEASYESEYQKWNLKVIQFQKATTFQLSSIKVLKLSWETVKQHVLNEQPFYAEEFKRLGVNLKPLVDAAENYQVVLAENRKMFNDIQELKGNIRVYCRVRPFLPGQKEKQSIVEHYGETELVVANPSKQGKEALRTFKFNKVFGPTATQVDVYNDIQAFIRSVLDGYNVCIFAYGQTGSGKTYTMSGPNGATAESVGVNYRALNDLFSIATTRQSTISYEIGVQVIEIYNEQVRDLLTSESTPKKTVGILTHSQPNGLAVPDASMQLVKSTADVIKLMDIGLKNRAKSATSMNERSSRSHSVVSINVRGVDMKSGSTLQGNLHLVDLAGSERVDRSEVTGDRLKEAQHINKSLSALGDVIFALAQKNAHVPYRNSKLTQLLQSSLGGHAKTLMLVQINSDVKSYSESLSTLKFAERVSGIELGAAKSTKDGKDVRELMEQVASLRDTILSKDEEIERLQLLKDLKSDKPTPE* 1305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2466 1304 SMART ch_5 35 138 IPR001715 GO:0005515
Ahy5g2466 1304 Gene3D - 554 588 - -
Ahy5g2466 1304 Gene3D - 367 401 - -
Ahy5g2466 1304 Gene3D - 589 619 - -
Ahy5g2466 1304 Gene3D - 493 526 - -
Ahy5g2466 1304 Gene3D - 402 433 - -
Ahy5g2466 1304 Gene3D - 620 651 - -
Ahy5g2466 1304 Gene3D - 28 140 IPR036872 -
Ahy5g2466 1304 SMART kinesin_4 922 1260 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ahy5g2466 1304 ProSiteProfiles Kinesin motor domain profile. 924 1252 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ahy5g2466 1304 PANTHER KINESIN-LIKE PROTEIN KLP-3 777 1294 - -
Ahy5g2466 1304 PANTHER KINESIN-LIKE PROTEIN KLP-3 3 565 - -
Ahy5g2466 1304 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 777 1294 - -
Ahy5g2466 1304 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 3 565 - -
Ahy5g2466 1304 Pfam Calponin homology (CH) domain 36 136 IPR001715 GO:0005515
Ahy5g2466 1304 CDD CH 39 140 IPR001715 GO:0005515
Ahy5g2466 1304 Pfam Kinesin motor domain 930 1251 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ahy5g2466 1304 MobiDBLite consensus disorder prediction 155 181 - -
Ahy5g2466 1304 Coils Coil 466 836 - -
Ahy5g2466 1304 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 924 1290 IPR027417 -
Ahy5g2466 1304 Gene3D - 652 841 - -
Ahy5g2466 1304 Gene3D Kinesin motor domain 919 1293 IPR036961 -
Ahy5g2466 1304 ProSiteProfiles Calponin homology (CH) domain profile. 33 140 IPR001715 GO:0005515
Ahy5g2466 1304 Coils Coil 1266 1286 - -
Ahy5g2466 1304 PRINTS Kinesin heavy chain signature 998 1019 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ahy5g2466 1304 PRINTS Kinesin heavy chain signature 1153 1171 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ahy5g2466 1304 PRINTS Kinesin heavy chain signature 1122 1139 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ahy5g2466 1304 PRINTS Kinesin heavy chain signature 1202 1223 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ahy5g2466 1304 Coils Coil 408 455 - -
Ahy5g2466 1304 Coils Coil 363 400 - -
Ahy5g2466 1304 MobiDBLite consensus disorder prediction 155 182 - -
Ahy5g2466 1304 SUPERFAMILY Calponin-homology domain, CH-domain 34 136 IPR036872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2466 Ahy-Chr5 99350785 99359116 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2466 912 1252 Calmodulin-binding Proteins AT5G65930 40.000 1.42e-67 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2466 K10406 - ini:109159585 1073.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2798 15 145723779 145731954 Ahy5g2466 5 99350785 99359116 hybridization
Ahy13g2100 13 38917019 38923236 Ahy5g2466 5 99350785 99359116 PCT
Ahy3g1807 3 37129943 37135929 Ahy5g2466 5 99350785 99359116 PCT
Ahy5g2466 5 99350785 99359116 Ahy13g2100 13 38917019 38923236 PCT
Ahy5g2466 5 99350785 99359116 Ahy3g1807 3 37129943 37135929 PCT