Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2465 ATGCGATTAAGCTGCAACGGTTGTCGTGTCCTTCGCAAGGGTTGCAACCTTGAATGCCCCATTAAACCCTGCCTCAATTGGATCAAATCGCCCGAATCACAGTCCAACGCCACCCTCTTCCTCGCCAAGTTCTACGGCCGCGCTGGCCTCCTCAACCTCCTCACCGCCGGCGACCCCAAGATCCGCCCAGCTATTTTTAAATCTTTGCTATACGAAGCTTGCGGCCGGATAGTGAACCCGGTTTTCGGTTCGACCGGGTTGCTATCGACTGGGAGCTGGCACTTGTGCGAAGCAGCTGTTGAAGCCGTTCTTAGCGGCGCGCCGATTAGACAACAGGATGCTTCAGATGGCGGTGGCCAGCTGCTAAACCCGTCTGATATTCGCCACGTGGTGAAGAGGGGGAAATCTTGCAGCTCCGATCATGTCCTTAAGCCCCGGAAGAGCCAGTTCAAGAGGCGCGCTGAGAAGTCAAAGCCGGAGCCGGAGCCGGAGGTTGAGCTGGATCAGGGTGTAGCTGAGTTGGTGGTGGAGGCTTGCGTAGTGAATGAGTTAGATGACTCGGCGAGCCCTGACTCAGGGTCTGGGCTGAGTGAGCACGTAAGTGTTGTTGTTGGCGGCGGCGCAGAAGCTGATAGCGGCTCAATTGAGAGTGTCAATCCGGCTCGAGCCGATGACGGGGAGCTTGAGCTGGAGCTGACTTTGGGGTGTCAGTGGCTTTGA 720 0.5694 MRLSCNGCRVLRKGCNLECPIKPCLNWIKSPESQSNATLFLAKFYGRAGLLNLLTAGDPKIRPAIFKSLLYEACGRIVNPVFGSTGLLSTGSWHLCEAAVEAVLSGAPIRQQDASDGGGQLLNPSDIRHVVKRGKSCSSDHVLKPRKSQFKRRAEKSKPEPEPEVELDQGVAELVVEACVVNELDDSASPDSGSGLSEHVSVVVGGGAEADSGSIESVNPARADDGELELELTLGCQWL* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2465 239 MobiDBLite consensus disorder prediction 139 167 - -
Ahy5g2465 239 MobiDBLite consensus disorder prediction 186 226 - -
Ahy5g2465 239 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Ahy5g2465 239 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Ahy5g2465 239 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 237 - -
Ahy5g2465 239 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2465 Ahy-Chr5 99314673 99316055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2465 1 234 AS2 family AT3G02550 45.833 1.06e-63 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy5g2465 LOB 1.50E-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2465 - - ahf:112802215 468.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2801 15 145785623 145788712 Ahy5g2465 5 99314673 99316055 hybridization