Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2459 ATGGCAAGGGCAAGAGACAGAACCGAGGATTTCAAAGATGCTGTTCGACACAGTGCTCGATCTTTGGGGTATGATGAGGCTAAGTTGGCGTCAGTTATGGCATCTTTCATTATTCATAAACCTCCACAAAGGTCGCCGTTTTCAAAAGCTGCACTGAAGACGCTCGAGAGTATTGGAGAACTAGAAGAATTTTTGTCAAAGCATAGAAAGGACTATATGGATTTGCACCGCACAACTGAAAAGGAGCGAGATAGTATTGAACATGAAGTTAGTGTTTTTGTTAAAACTTGTCAGGAACAAATTGACGTTCTCAAAAATAGTATAAATCAAGAAGAGGAAACATCAAAAGGATGGCTTGGCATCACAACGTCAAAGGCTAATGCTGACACCATTGCCCACAAACATGGGGTGGTTCTAATCTTAAGTGAGAAACTCCATTCAGTTTCAGCTCAGTTTGATAAGCTTAGAGCTGTTCGTTTCCAAGAGGCCATTAATCGAGCAATGCCACGAAGAAAACTTAATCGCCTAACCAAGAAAGATTCTATAGAAACCCCTAAATCAGATGACGTGGAGCTCGGAGAACCCAGTGAATTACACAATGAGCCTCTAAGAGTCCAACAACAGCTATTGGATGATGAAACACGCGCACTTCAGGTGGAATTGTCCAATCTTCTAGATACAGTTCAAGAAACTGAAACTAAGATGGTGGAAATGTCTGCATTAAATCACCTCGTATCTACACACGTTTTGCAACAAGCTCAGCAAATTGAGCATCTGTATGAGCAGGCTGTTGAAGCTACTAAGAATGTTGAACTTGGCAACAAAGAACTTTCCCAAGCCATTCAGCGGAATAGCAGCAGCAGAACATTTCTTATACTTTTTCTATTTGTGCTTACATTTTCAGTTCTCTTTCTTGATTGGTACAGTTAA 930 0.4075 MARARDRTEDFKDAVRHSARSLGYDEAKLASVMASFIIHKPPQRSPFSKAALKTLESIGELEEFLSKHRKDYMDLHRTTEKERDSIEHEVSVFVKTCQEQIDVLKNSINQEEETSKGWLGITTSKANADTIAHKHGVVLILSEKLHSVSAQFDKLRAVRFQEAINRAMPRRKLNRLTKKDSIETPKSDDVELGEPSELHNEPLRVQQQLLDDETRALQVELSNLLDTVQETETKMVEMSALNHLVSTHVLQQAQQIEHLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLILFLFVLTFSVLFLDWYS* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2459 309 Gene3D - 211 306 - -
Ahy5g2459 309 MobiDBLite consensus disorder prediction 175 198 - -
Ahy5g2459 309 Coils Coil 94 114 - -
Ahy5g2459 309 PANTHER SYNTAXIN-18 5 309 - -
Ahy5g2459 309 SUPERFAMILY t-snare proteins 55 273 IPR010989 GO:0016020|GO:0016192
Ahy5g2459 309 Pfam SNARE-complex protein Syntaxin-18 N-terminus 6 86 IPR019529 -
Ahy5g2459 309 PANTHER SYNTAXIN-18 5 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2459 Ahy-Chr5 99182152 99185915 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2459 67 309 SNARE and Associated Proteins AT1G51740 72.951 2.07e-110 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2459 K08492 - gmx:100778011 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2810 15 145941222 145944844 Ahy5g2459 5 99182152 99185915 hybridization