LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy5g2449	ATGGTAGCCATACTCCTTGGCATATTAGTATTTATAGTCGCCATTATTGTTTGGCTGCATCCAAAGGATAATCGAAATAAAGTTCCACCAGGTCCGAAGGCATTGCCACTCATCGGTAACCTCCACATGCTACGAAAACAACCACACCGCACCCTCCAAGCCCTCGCCGCGAAATACGGACCCATAATGTTCTTGAAGCTAGGGCAAGTTCCAACTGTCGTTGTTTCTTCTCCAGAAGCTGCTGAGCTCTTTCTCAAGACCCATGACCTAGATTTTGCAAACAGGCCTAAATTTCAGGTTGTGGAGACGTTTTTCAGTGGCAGTAAGGGCATTGGGATGTCACAGTACGGTTGGTATTGGCGGCACGTGAGGAAGTTGTGCACATTGCAACTTTTGAGTGGATCAAAAGTTGAGATGTATGGTCCTTTAAGGAGGAAAGAGTTGGGAATGTTGGTGAAGTCTTTATGCAATGCTTCTGCGTCGGGTGAGGTTTTGAATCTTAGTGTGATGCTGAAGGAGTTTGCTGAGAATATCACTTACAATATGGTATTCGGTCGAAGCCATGACAATAATAGGTTCAACTTAGAGGCCCTTGTTGACTTAGTCGGTTCTGCTGGAGCTTTCAATATTGCGGATTATGTGCCTATCCTTGGCATCTTTGATTTTCAGGGAATAAGAAAGAAAGTAAATAAATTAAGAAAGCCAATTAACGAGGCACTGGAGCATATTATTGAAGATCATCAGAATACCAACTACGATGATGATGATGATAGTCCACAGAAAAAGGATTTTGTTGACATATTGCTATCATTTTTGGATCAACCCATGGATCCTGATGAAGAACAACACAAACACGTTCTGACAAGAAATGACATCAAGGCTATTATGATGGACATGATTGGTGCAGCATATGAAACATCAACTTCGGCAATTGAATGGGTAATGTCAGAGCTACTAAAGCATCCTAGTGTGATGAAGAAACTTCAACACGAGATACAACATGCAGTGGGAGGAATTAACAAAGAAGTTGAAGAGAATGAAATAGAGAATATGCCTTATTTGGATATGGTTGTGAAAGAGACCTTAAGATTATACCCGGTTGCACCTTTGTTAGTGCCTCATGTGTCTCGAAACGACGTCGTTATTGAAGGTTATTACATAAAAAGAAATACACAAATCATAATAAACGCATGGGCAATTGGAAGGGATCCAAGAGTTTGGTCAGAAAATGCAGAGAAGTTCTATCCAGAGAGATTCGAACATAATAATGTAGACATTCTTGGACGCGACTTTAGATTCATACCATTTGGTTCTGGTCGAAGAGGGTGCCCTGGAGCTCAATTGGGATTTGCAACTATCAAGTTTGTTGTGGCTCAGTTGGTGCATTGCTTTAACTGGGAGCTTCCTTTTGGCATGTCTTGTGATGAATTAGACATGAATGAAACATTTGGCATCACTATACCAAGAACTACACACTTGCTAGCTATTCCAACTTTCAGGCTAACAGCTGAAGCTGCTAGTAACAAAGAATAA	1533	0.4123	MVAILLGILVFIVAIIVWLHPKDNRNKVPPGPKALPLIGNLHMLRKQPHRTLQALAAKYGPIMFLKLGQVPTVVVSSPEAAELFLKTHDLDFANRPKFQVVETFFSGSKGIGMSQYGWYWRHVRKLCTLQLLSGSKVEMYGPLRRKELGMLVKSLCNASASGEVLNLSVMLKEFAENITYNMVFGRSHDNNRFNLEALVDLVGSAGAFNIADYVPILGIFDFQGIRKKVNKLRKPINEALEHIIEDHQNTNYDDDDDSPQKKDFVDILLSFLDQPMDPDEEQHKHVLTRNDIKAIMMDMIGAAYETSTSAIEWVMSELLKHPSVMKKLQHEIQHAVGGINKEVEENEIENMPYLDMVVKETLRLYPVAPLLVPHVSRNDVVIEGYYIKRNTQIIINAWAIGRDPRVWSENAEKFYPERFEHNNVDILGRDFRFIPFGSGRRGCPGAQLGFATIKFVVAQLVHCFNWELPFGMSCDELDMNETFGITIPRTTHLLAIPTFRLTAEAASNKE*	511

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Ahy5g2449	510	Gene3D	Cytochrome P450	17	496	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ahy5g2449	510	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	436	445	IPR017972	GO:0005506\|GO:0016705
Ahy5g2449	510	PANTHER	FLAVONOID 3'-MONOOXYGENASE-RELATED	11	502	-	-
Ahy5g2449	510	PANTHER	CYTOCHROME P450 FAMILY PROTEIN	11	502	-	-
Ahy5g2449	510	SUPERFAMILY	Cytochrome P450	29	500	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ahy5g2449	510	Pfam	Cytochrome P450	29	488	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ahy5g2449	510	PRINTS	E-class P450 group I signature	311	337	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ahy5g2449	510	PRINTS	E-class P450 group I signature	56	75	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ahy5g2449	510	PRINTS	E-class P450 group I signature	433	443	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ahy5g2449	510	PRINTS	E-class P450 group I signature	174	192	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy5g2449	Ahy-Chr5	98945067	98954024	Dispersed/Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy5g2449	25	498	Cytochrome P450	AT5G24950	37.422	1.37e-115	348

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy5g2449	-		-	adu:107490367	728.783

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ahy5g2449	5	98945067	98954024	Ahy13g2089	13	38378912	38385756	PCT

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