Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2416 ATGGACGACATGGAAGACGACGCAAGGTACCCTCCAAAATCCTTCCCTTTGAACCGACAGAACCCTTCCCACCGCCACAAACACCCAATTAGACCACCCCCATTCCACCACCACAACCCTCGCTACGAGGACCAAGAGGATGACGATTACGACGACGAAGAAGAACACGCCGAATTCGAAAACTACGGAAACGATGTCGTTGATAACACCAACAACGAAGACGATGACGACGACTGTGGTAACGGGGTCCAAAACGGGTATTTCAAGAAGAGGAAGGTCGGGGTAGGAGGTTCCCCTGTTCCGACGGGATACGAGTTCGCGCCACGTGTCAAATACTCATACGGCGATGATTGGTCAGAGCATGCCACGTTCGTGCTGCTTGAGGTTTGGGGTGACAAGTTCCTGCAACTTGGGAGGACAAGTTTGAGGTCTGACGATTGGCTTGACGTTGCAGAGAAGGTGTCTGACGAATTGAAAGCTGAGAAGAGCGTTGCACAATGCAAGAGCATGTTGGATAAGCTCAAGAGAAGGTACAAGAAGGAGAAAGGAAAGGTTGAAGAGTTGGGTTTGGGTTCTTGCAAGTGGGCATTCTTCAAGAAGATGGACATGTTGATGGCTTCGTCGACACGGCAGGAGTATGGTCTCGCTTGTGGCGTCGATGGTGGGGAGTATGTGTTCATGAACACAAGGGTGTACCTTAGTAGGTCCAATGGGTTTGATGAGATGAGGGACAGTCCCGGTGAGAGTGAAAGTGATGAGGATGAGGATGGTTTAGATGGTCATGGTGTTGGGGTTGGGGTTGCTTCTGCGGCAAGGAGGAGGAGTGGTGTTGGTGGTGATGGTGAGGATGAGGAGGAGGAGGAGAGTTCGTTTCGTGTGCTGGCAGATTCGATTCAGAAGTTTGGGAAGATATACGAGAAGATTGAGAATAGTAAGAGGCAGCAGATGATGGAGTTGGAGAAGATGAGGCTGGATTTCAATAGAGAGCTAGAGTTGCAGAAGAAGCAGATATTGGAGAGGGCTCAGGCCGAGATCGCAAAGATACAGGATGTCGATGAGGATGAAACCGACACTTCTACCGAGAATCTCAGTGAATGA 1098 0.5018 MDDMEDDARYPPKSFPLNRQNPSHRHKHPIRPPPFHHHNPRYEDQEDDDYDDEEEHAEFENYGNDVVDNTNNEDDDDDCGNGVQNGYFKKRKVGVGGSPVPTGYEFAPRVKYSYGDDWSEHATFVLLEVWGDKFLQLGRTSLRSDDWLDVAEKVSDELKAEKSVAQCKSMLDKLKRRYKKEKGKVEELGLGSCKWAFFKKMDMLMASSTRQEYGLACGVDGGEYVFMNTRVYLSRSNGFDEMRDSPGESESDEDEDGLDGHGVGVGVASAARRRSGVGGDGEDEEEEESSFRVLADSIQKFGKIYEKIENSKRQQMMELEKMRLDFNRELELQKKQILERAQAEIAKIQDVDEDETDTSTENLSE* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2416 365 MobiDBLite consensus disorder prediction 1 83 - -
Ahy5g2416 365 MobiDBLite consensus disorder prediction 20 35 - -
Ahy5g2416 365 Coils Coil 164 184 - -
Ahy5g2416 365 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 43 359 IPR044823 -
Ahy5g2416 365 MobiDBLite consensus disorder prediction 45 59 - -
Ahy5g2416 365 Coils Coil 305 347 - -
Ahy5g2416 365 Gene3D - 118 180 - -
Ahy5g2416 365 MobiDBLite consensus disorder prediction 237 292 - -
Ahy5g2416 365 PANTHER ALCOHOL DEHYDROGENASE TRANSCRIPTION FACTOR MYB/SANT-LIKE FAMILY PROTEIN 43 359 - -
Ahy5g2416 365 Pfam Myb/SANT-like DNA-binding domain 116 203 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2416 Ahy-Chr5 98207646 98210484 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2416 116 347 Trihelix Transcription Factor Family AT1G54060 31.439 3.78e-20 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Ahy5g2416 Myb_DNA-bind_4 4.20E-17 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2861 15 147344587 147347365 Ahy5g2416 5 98207646 98210484 hybridization