Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2411 ATGACAGCTCTTTCCAACGGCCACGCCGCTAATAACTCTTCTCCTCTTTTCAAGATCCCACCCATCAAATTCACCAATCTCTTCATCAATGGCCACTTTGTTCATTCTCTCTCAGGAAACGAGTTTGAGACAATAGATCCGAGAACAGGAGAGGTAATAGCAAAAATCTCGGAGGGAAGAAAAGAAGACATTGATGTGGCTGTTAAAGCGGCACGTGAGGCATTTGACAACGGTCCATGGCCACGCATGTCTGGTGCGGAAAGAGCAAAAATCATGATGAAATGGGCAGATCTTATTGAAGAAAACGTAGAAGAACTAGCAGCATTAGACGCCATTGATGCTGGAAAGTTGTACCACTTAGTTAAGGTCTTGGACATCCCTGCAGTTGCAAATTGTTTACGCTACTATGCCGGTGCTGCCGATAAGATCCATGGCGAGGTGCTAAAAGGTGCTAGAGAGCTCCATGCATATACTTTGATGGAACCAATTGGTGTTGTTGGACACATCATTCCTTGGAATTTCCCTAGCACCATGTTTGCTGCCAAGGTTAGTCCTTCCTTGGCTGCCGGTTGCACCGTCGTCCTTAAGCCGGCCGAACAAACACCTCTCTCGGCTCTGTTTTTCGCGCATTTAGCTAAACAGGCTGGAATTCCGGACGGAGTTCTTAATGTAGTACCCGGATTTGGCCCAACTGCTGGTGCTGCAATAAGCTCACACATGGACATTGATAAGGTTAGCTTCACCGGTTCAACGGAAGTAGGCCGTGCCATAATGCACGCGGCGGCTAGCAGCAATCTGAAACCGGTGTCACTTGAATTAGGAGGAAAGTCACCTCTTCTAATATTTGATGATGCTGATGTAGATAAAGCTGCTGATCTTGCTCTCTTGGGAATCTTGTTTAATAAGGGAGAAATTTGTGTTGCAAGTTCAAGGGTGTTTGTTCAGGAAGGGATATATGATGAGTTTGAGAAGAAGTTGGTTAAGAAAGCAAAAGCTTGGGTTGTTGGAGATCCTTTTGATCCTCAATCTCAGCAAGGCCCTCAGGTTGACAAGAACCAATTTGAGAAAATCCTTTCATATATAGAGATTGGAAAGGAAGAAGGAGCAACCCTACTAACAGGTGGTAAAAAAGTGGGCAACAAGGGCTACTACATTGAACCTACAATCTTCTCTAATGTCAAGGAAAACATGCGCATAGCACAGGATGAAATATTTGGCCCTGTCTTGGCACTGATGAAGTTCAGGACGATTGAGGAAGGAATTAAGAGTGCTAACAACAGTAGATATGGTCTAGCAGCAGGAATAGTGACGAAGAACATAGACACAGCAAACACAGTGTCAAGAGCCATTCGTGCAGGCATTATTTGGATCAATTGCTACTTTGCTTTTGGGAATGACATTCCTTATGGAGGGTATAAGCAGAGTGGGTTTGGAAGAGATTTTGGAATGGAGGGTCTACATAAGTACCTACAAGTTAAATCTGTTGTCACTCCCATATACAATTCTCCTTGGCTTTGA 1518 0.444 MTALSNGHAANNSSPLFKIPPIKFTNLFINGHFVHSLSGNEFETIDPRTGEVIAKISEGRKEDIDVAVKAAREAFDNGPWPRMSGAERAKIMMKWADLIEENVEELAALDAIDAGKLYHLVKVLDIPAVANCLRYYAGAADKIHGEVLKGARELHAYTLMEPIGVVGHIIPWNFPSTMFAAKVSPSLAAGCTVVLKPAEQTPLSALFFAHLAKQAGIPDGVLNVVPGFGPTAGAAISSHMDIDKVSFTGSTEVGRAIMHAAASSNLKPVSLELGGKSPLLIFDDADVDKAADLALLGILFNKGEICVASSRVFVQEGIYDEFEKKLVKKAKAWVVGDPFDPQSQQGPQVDKNQFEKILSYIEIGKEEGATLLTGGKKVGNKGYYIEPTIFSNVKENMRIAQDEIFGPVLALMKFRTIEEGIKSANNSRYGLAAGIVTKNIDTANTVSRAIRAGIIWINCYFAFGNDIPYGGYKQSGFGRDFGMEGLHKYLQVKSVVTPIYNSPWL* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2411 505 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 299 310 IPR016160 GO:0016491
Ahy5g2411 505 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 275 464 IPR016163 GO:0016620
Ahy5g2411 505 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 5 505 - -
Ahy5g2411 505 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 5 505 - -
Ahy5g2411 505 SUPERFAMILY ALDH-like 18 501 IPR016161 GO:0016491
Ahy5g2411 505 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 271 278 IPR029510 GO:0016491
Ahy5g2411 505 Pfam Aldehyde dehydrogenase family 38 495 IPR015590 GO:0016491
Ahy5g2411 505 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 29 493 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2411 Ahy-Chr5 98123714 98134130 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2411 4 505 Aldehyde Dehydrogenase Gene Family AT3G24503 71.372 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2411 K12355 - gmx:100783920 848.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2871 15 147614320 147624227 Ahy5g2411 5 98123714 98134130 hybridization
Ahy13g2062 13 37580880 37595667 Ahy5g2411 5 98123714 98134130 PCT
Ahy3g1777 3 35186793 35199155 Ahy5g2411 5 98123714 98134130 PCT
Ahy5g2411 5 98123714 98134130 Ahy13g2062 13 37580880 37595667 PCT
Ahy5g2411 5 98123714 98134130 Ahy3g1777 3 35186793 35199155 PCT