Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2372 ATGGGGGAAGGTGAAGGAGAAGGGGTTGATGGCGGTTCAAAGACGGCAACGTCATCGGTGGATGCTGCTGTAACGACGCCGGTGGAGGCTCCTACGGGGAAGAAACTCGCCCGACAGCTCGATTTTACGGCCTTGCCGGAGAAAAGATCGCAACAGCAATTGCAACAACGATTGCATTCCCAGGTTCAGGTGCAGCAGCAGAAGCAGATTGTGGCTCCGGTGATAGCGGCGCAGCCGCAGATTATGGCACAGCCGTCGGTGGTTGTAAAGCCGGTTCCTTCGCCGCAGGCACCTGCAGTGAGAGTGGGGAAACCAGAATCTCCAAAATCAAGATCAAGACCTAACTTTGATATAAAGGAAGCTACTCCAAAGAAGCAAAAGCAGTGCAATTGTAAACACTCTAAATGTTTAAAGCTATATTGCGAATGTTTTGCATCGGGAATATATTGCGACGGTTGCAATTGTGTAAATTGTTTCAACAATGTTGAAAATGAGGCTGCTAGACGAGAAGCTGTTGAAGCTACTTTAGAGCGCAATCCAAATGCATTTAGGCCGAAAATTGCAAGCAGCCCCCATGGAACACGTGATAGCAGGGAGGAAGCTGGTGAAGTTTTAATATTAGGAAAGCATAACAAGGGTTGCCACTGTAAGAAATCAGGGTGTCTCAAGAAGTACTGTGAGTGTTTCCAAGCCAACATCCTTTGTTCTGAAAATTGTAAATGCATGGACTGCAAGAATTTTGAGGGAAGCGAAGAGAGACAGGCCTTGTTTCATGGAGATCAAAATAACATGACATATATTCAGCAGGCAGCAAATGCTGCAATAACTGGAGCAATTGGTACATCTGGTTATTCATCGCCTCCGGTATCCAAGAAAAGAAAAGGCCAGGAAATCTTCGTTGGGCAAACACCCAAGGAACCATCCGTTAGCAAGTTGGGACAACAGGTAAACCATGTCCGAAGTCCAGCTCCATCCCCATCCTTGCCCTCCCTTCCGGGCACTCGTGTTGGAACTGCAACACTTGGTCCTTCAAAATTTTCATACAGGTCTCTTTTAGCAGATATCATACAACCACAGCACTTGAAAGAGCTTTGCTCAGTTTTGGTGCTGCTATCTGGACAAGCTGCAAAGACACTTACAGACCAGAAAAATTTAATGGAAAAGCATACAGAAGATCAGACAGAAACTTCACTTGCTTCTTCAAATCAGTCACAATTACCAAATCAAAAAGAAGGTGATGTTGAGAAAGCTATGGCTGATGATTGTTCGAGCGCAAACCAAGCAGATAAAATCAGCCCGGACAATTCAAGTTCAGATGGTGCTGACGTCCCGAAAGGGAGGCCAATGTCTCCTGGGACTTTAGCTTTGATGTGTGACGAGCAAGATACGTTCATGACAGCTGCCTCTCCAGTTGGCACAATGGCTCATGGCTGCAACACATCCTCGCAATTTCCTTACGGACAAGGAATGACAGAGGAATACGCGGAGCAAGAAAGGATTGTCTTAACAAAGTTTAGAGATTTCCTTAACAGAGTTATCACCATGGGAGAAATAAATGAAACGAAGTGTTCGTCGTTAGCTAGAAGTGAGTTGGAGAGCCAGAAGGATCCAATCAATAACGGCACTGGAAATACGACTACCGAGAGTTTGCATCAGCAGGGTGCCACTAGCAATGGTGTTGCCAAATCGATTGTTCCACCTACGGCTGCAGCAGCTTCGGCTTCACCAGTCCCCGGTCATAATAATGTTCCTGAAAATGGAGAAAATAAGATGAAGACTGAAAAATAG 1788 0.4586 MGEGEGEGVDGGSKTATSSVDAAVTTPVEAPTGKKLARQLDFTALPEKRSQQQLQQRLHSQVQVQQQKQIVAPVIAAQPQIMAQPSVVVKPVPSPQAPAVRVGKPESPKSRSRPNFDIKEATPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCVNCFNNVENEAARREAVEATLERNPNAFRPKIASSPHGTRDSREEAGEVLILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNNMTYIQQAANAAITGAIGTSGYSSPPVSKKRKGQEIFVGQTPKEPSVSKLGQQVNHVRSPAPSPSLPSLPGTRVGTATLGPSKFSYRSLLADIIQPQHLKELCSVLVLLSGQAAKTLTDQKNLMEKHTEDQTETSLASSNQSQLPNQKEGDVEKAMADDCSSANQADKISPDNSSSDGADVPKGRPMSPGTLALMCDEQDTFMTAASPVGTMAHGCNTSSQFPYGQGMTEEYAEQERIVLTKFRDFLNRVITMGEINETKCSSLARSELESQKDPINNGTGNTTTESLHQQGATSNGVAKSIVPPTAAAASASPVPGHNNVPENGENKMKTEK* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2372 595 MobiDBLite consensus disorder prediction 1 35 - -
Ahy5g2372 595 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 34 574 - -
Ahy5g2372 595 ProSiteProfiles CRC domain profile. 125 249 IPR005172 -
Ahy5g2372 595 PANTHER TESMIN/TSO1-RELATED 34 574 IPR028307 -
Ahy5g2372 595 MobiDBLite consensus disorder prediction 425 439 - -
Ahy5g2372 595 MobiDBLite consensus disorder prediction 386 452 - -
Ahy5g2372 595 MobiDBLite consensus disorder prediction 395 410 - -
Ahy5g2372 595 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 212 246 IPR005172 -
Ahy5g2372 595 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 126 161 IPR005172 -
Ahy5g2372 595 SMART CXC_2 124 164 IPR033467 -
Ahy5g2372 595 SMART CXC_2 209 250 IPR033467 -
Ahy5g2372 595 MobiDBLite consensus disorder prediction 91 119 - -
Ahy5g2372 595 MobiDBLite consensus disorder prediction 528 595 - -
Ahy5g2372 595 MobiDBLite consensus disorder prediction 528 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2372 Ahy-Chr5 97278424 97286208 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2372 34 568 CPP Transcription Factor Family AT4G29000 55.142 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Ahy5g2372 TCR 3.20E-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2372 - - gmx:100777698 824.313