Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2350 ATGGAACGCATCATCGCCTCCAAGTACAAGCTCGGCCGCAAGATCGGAAGCGGTTCCTTCGGCGAAATCTACCTAGCTACGCATGTTGATACCTTCGAGATCGTCGCCGTCAAGATCGAGAACACTAAAACGAAGCATCCTCAATTGCTTTATGAGGCCAAGCTTTACAACATTCTCCAAGGAGGAAGCGGCATTCCTAGCATAAGATGGTCTGGTGTAGATGGGGAGGATAATGTTCTTGTGATGGATTTGCTGGGGCCTAGTCTTGAGGATCTCTTTGTGTATTGTGGAAGGAAGTTCTCATTGAAGACAGTATTGATGTTGGCTGATCAAATGATGACTAGAATAGAATATGTGCATTCCAAAGGTTTTCTACATAGAGATATAAAGCCTGACAACTTCCTCATGGGACTTGGTCGGAAAGCAAACCAGGTTTACATAATTGATTTTGGGCTTGCAAAACGATATCGGGACTCTACAACCAATCGCCACATCCCTTACAGGGAGAACAAAAACTTAACGGGGACTGCACGCTATGCAAGTTGCAATACACATCTTGGGATTGAGCAAAGTCGGCGGGATGATTTGGAGTCATTGGGATATGTGCTTCTCTACTTTCTCAGAGGAAGCCTTCCTTGGCAAGGTCTAAAGGCTGCAACAAAGAAGCAGAAGTATGACAAAATATGTGAGAAGAAAGTGTCAACCCCTATTGAGGTTCTTTGCAAATCTCATCCTGTAGAGTTTGCTTCATACTTCCATTACTGCCACTCTCTGACCTTCGATCAGCGACCTGACTATGGATTCTTGAAGCGCCTATTTCGGGAACAATTTGCTCGGGAAGGGTTTGAATTTGATTATGTGTTTGATTGGACTATTTTAAAGTACCAGCAGGCACAAAAGAATAGAGTCCAGGCTCACTCATCTGTGGTCCCGGGAGCAAGCAACAGTCGTGCAACACCAATGGACTTTGACAACCATCGAGGTGATGCTACAGAGCACATTAAATCAGGCAATGCCACTGGCTCTGGTGTTAAATTTCAGTTTAAATCACCTGCTGTTAAAAATCCACTCGACAAGAATGACAAGAATATTTTTGGCGAAGCAAATATACCCTCTACTTCCCATTCTCATGCTGGTCCCTCAAAAAGGAACTCCTTGAAGCCTGCTCCGTCCTCCGATGCTGTTAACCCTGGCCATGGGCAAGGCAGTAAAGTTGGCCCTTCAAGTAGCTGGATTTCATCTCTGCATCGCATATCATCTGCCAAATGA 1269 0.4492 MERIIASKYKLGRKIGSGSFGEIYLATHVDTFEIVAVKIENTKTKHPQLLYEAKLYNILQGGSGIPSIRWSGVDGEDNVLVMDLLGPSLEDLFVYCGRKFSLKTVLMLADQMMTRIEYVHSKGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKRYRDSTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPVEFASYFHYCHSLTFDQRPDYGFLKRLFREQFAREGFEFDYVFDWTILKYQQAQKNRVQAHSSVVPGASNSRATPMDFDNHRGDATEHIKSGNATGSGVKFQFKSPAVKNPLDKNDKNIFGEANIPSTSHSHAGPSKRNSLKPAPSSDAVNPGHGQGSKVGPSSSWISSLHRISSAK* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2350 422 Pfam Protein kinase domain 9 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g2350 422 MobiDBLite consensus disorder prediction 366 422 - -
Ahy5g2350 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Ahy5g2350 422 PANTHER CASEIN KINASE-RELATED 1 406 - -
Ahy5g2350 422 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Ahy5g2350 422 MobiDBLite consensus disorder prediction 306 321 - -
Ahy5g2350 422 MobiDBLite consensus disorder prediction 306 422 - -
Ahy5g2350 422 Gene3D Transferase(Phosphotransferase) domain 1 1 337 - -
Ahy5g2350 422 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g2350 422 SMART serkin_6 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g2350 422 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Ahy5g2350 422 PANTHER CASEIN KINASE 1-LIKE PROTEIN 3-RELATED 1 406 - -
Ahy5g2350 422 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2350 Ahy-Chr5 96769784 96773717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2350 9 215 EF-hand Containing Proteins AT4G23650 29.577 3.40e-14 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Ahy5g2350 Pkinase 2.60E-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2350 K08960 - gmx:100805890 746.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2919 15 149004980 149008937 Ahy5g2350 5 96769784 96773717 hybridization