Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy5g2349 | ATGCCGATGCAGGAAGAGGAGCGAGTATTGGAGATCAACTTGATCTCCGCACAGGGACTCCAACCACCTTCTTCTCCGCTTCGGAAGCTCCAAACCTACGCTCTCACGTGGATCGATCCCTCAACCAAGCTCCGAACCAGACTCGATAGTCTTGGCGGTCAAAACCCTACTTGGAACGACAAGTTCCTCTTCCGCGTCACGCCGGAGTTTCTCTCCGGCGACACTTCCGCCGTCTCTGTTGCCATTTACGCCGTTGGAACATTCCGCGATCACCTCATCGGCACCGTCACTTTCTTCATCGGGAACGTCCTCTCTGGCGGCGCCGGAGTGCCTTGCTTCAGCGCGTTTCAGATTCGCCGTCCCTCCGGGAGGTTCCACGGCGTCATGAACATCGGAGCCATGGTTGCCGACGTCTCGGATTTTCCGGCGCTGCATAAGATATCGGCGATAGGGTACAGAGACCTGATGGGGATGAAGATGAAGGAGCAGAGGAAGAAAAAGAAGAATAAGAAGGCGCCGGAGGAGGAACTTTCGAGCGATTCTTGCGAGAATTCTTGTGCGGATTCGGTGGAGGAGGCGGATTCATCCTCCTCTTCGTCGTCGCTGTCTCCGAGTGCGACGGGGGCTGGGGCGGTGTTGAAGGAGTGGAACGGGGTGAGGGAATTGGCAGGAAACAAAGGACTTGCCGCTTCTGGATTCTTGTGCTGCTTCATGGTTGCCCCGAGAACTGTTCCAGAGCACCATAGTTTTTGCACGAAACCAAGGAGGTTATTGAGGAAAGATGGTAACTCAATGCGAGAGATTGCATCTGAGGACTTGTCTCAAGGTGGTGCCACAGAGGAAAACGTGATGGATTGGGTCAAGCATGACAACCGAAGAATGCTTCATGTTGTATATCGTGTTGGGGACTTGGAAAGGACCATAAAATTTTATACAGAGTGCTTGGGGATGTCGGTTCTCAGAATTCGTGACTTGCCGGAGCTTAGATGTGCTAATGCCTTTCTTGGCTATGGACCTGAAGATGAAAGCTTTGTTATTGAACTGACATACAATTATGGGATTGATGAGTATGACATTGGAAATGGATTTGGCCATTTTGGTGTTTCTTTTGGTGATATTTCAAGCATAGTGGACATTGTAAGAGATAATAAGGATGGAAAAATAATTAGAGAGCCCGGTCCTGTCGAAGGAGGATGCTCCATAATTGCATTCATTGAAGATCCTGATGGTTATAAATTTGAACTTCTAGAAAGGGTTCTCTCTCATGAACCTTTGTGCCGAGTAATGCTTCGAGTGGGTGATCTTAATCGATCCATCGGATTTTATGAGAAGGCTTGTGGTATGCAGCTACTTTATACACGAGATAATCCAGAATGCCAGTATACCATAGCAATCATGGGTTATGGCCCAGAAGATGAAAATGCTGTTCTGGAGTTGACATACAACTACGGAGTCACAGAATATGATAAAGGAGATGGTTATGCCCAGATTGCAATAGGCACAGATGATGTGTACAGAACTGCAGAAGCAATCAAACTTGCTGGTGGAAAGATCACCCGGGAACCTGGACCGGTACCCGGCATCGGAACGAAAATAACTGCATGCTTGGACCCTGATGGTTGGAAAACGGTTTTTGTGGATAATGTCGATTTCCTTAGGGAGTTGGAGTAA | 1671 | 0.4865 | MPMQEEERVLEINLISAQGLQPPSSPLRKLQTYALTWIDPSTKLRTRLDSLGGQNPTWNDKFLFRVTPEFLSGDTSAVSVAIYAVGTFRDHLIGTVTFFIGNVLSGGAGVPCFSAFQIRRPSGRFHGVMNIGAMVADVSDFPALHKISAIGYRDLMGMKMKEQRKKKKNKKAPEEELSSDSCENSCADSVEEADSSSSSSSLSPSATGAGAVLKEWNGVRELAGNKGLAASGFLCCFMVAPRTVPEHHSFCTKPRRLLRKDGNSMREIASEDLSQGGATEENVMDWVKHDNRRMLHVVYRVGDLERTIKFYTECLGMSVLRIRDLPELRCANAFLGYGPEDESFVIELTYNYGIDEYDIGNGFGHFGVSFGDISSIVDIVRDNKDGKIIREPGPVEGGCSIIAFIEDPDGYKFELLERVLSHEPLCRVMLRVGDLNRSIGFYEKACGMQLLYTRDNPECQYTIAIMGYGPEDENAVLELTYNYGVTEYDKGDGYAQIAIGTDDVYRTAEAIKLAGGKITREPGPVPGIGTKITACLDPDGWKTVFVDNVDFLRELE* | 557 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy5g2349 | 556 | ProSiteProfiles | Vicinal oxygen chelate (VOC) domain profile. | 424 | 548 | IPR037523 | - | |
| Ahy5g2349 | 556 | Gene3D | C2 domain | 1 | 124 | IPR035892 | - | |
| Ahy5g2349 | 556 | Pfam | C2 domain | 10 | 106 | IPR000008 | - | |
| Ahy5g2349 | 556 | SUPERFAMILY | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 292 | 418 | IPR029068 | - | |
| Ahy5g2349 | 556 | MobiDBLite | consensus disorder prediction | 161 | 205 | - | - | |
| Ahy5g2349 | 556 | ProSitePatterns | Glyoxalase I signature 2. | 360 | 372 | IPR018146 | GO:0004462|GO:0046872 | |
| Ahy5g2349 | 556 | ProSiteProfiles | Vicinal oxygen chelate (VOC) domain profile. | 293 | 418 | IPR037523 | - | |
| Ahy5g2349 | 556 | Pfam | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily | 428 | 542 | IPR004360 | - | |
| Ahy5g2349 | 556 | Pfam | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily | 294 | 415 | IPR004360 | - | |
| Ahy5g2349 | 556 | Gene3D | - | 421 | 556 | IPR029068 | - | |
| Ahy5g2349 | 556 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 3 | 135 | IPR035892 | - | |
| Ahy5g2349 | 556 | MobiDBLite | consensus disorder prediction | 179 | 205 | - | - | |
| Ahy5g2349 | 556 | SUPERFAMILY | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 425 | 548 | IPR029068 | - | |
| Ahy5g2349 | 556 | ProSitePatterns | Glyoxalase I signature 1. | 296 | 317 | IPR018146 | GO:0004462|GO:0046872 | |
| Ahy5g2349 | 556 | PANTHER | LACTOYLGLUTATHIONE LYASE CHLOROPLASTIC-RELATED | 240 | 556 | - | - | |
| Ahy5g2349 | 556 | PANTHER | LACTOYLGLUTATHIONE LYASE | 240 | 556 | - | - | |
| Ahy5g2349 | 556 | SMART | C2_3c | 9 | 112 | IPR000008 | - | |
| Ahy5g2349 | 556 | CDD | C2_SRC2_like | 10 | 131 | IPR044750 | GO:0006952 | |
| Ahy5g2349 | 556 | ProSiteProfiles | C2 domain profile. | 1 | 113 | IPR000008 | - | |
| Ahy5g2349 | 556 | Gene3D | - | 266 | 418 | IPR029068 | - | |
| Ahy5g2349 | 556 | TIGRFAM | glyox_I: lactoylglutathione lyase | 425 | 548 | IPR004361 | GO:0004462|GO:0046872 | |
| Ahy5g2349 | 556 | TIGRFAM | glyox_I: lactoylglutathione lyase | 282 | 426 | IPR004361 | GO:0004462|GO:0046872 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy5g2349 | Ahy-Chr5 | 96739570 | 96743510 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Ahy5g2349 | 425 | 545 | Calmodulin-binding Proteins | AT1G08110 | 25.850 | 3.02e-08 | 52.8 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Ahy15g2921 | 15 | 149077751 | 149081732 | Ahy5g2349 | 5 | 96739570 | 96743510 | hybridization | |
| Ahy13g2013 | 13 | 36028170 | 36031742 | Ahy5g2349 | 5 | 96739570 | 96743510 | PCT | |
| Ahy3g1734 | 3 | 33969059 | 33972647 | Ahy5g2349 | 5 | 96739570 | 96743510 | PCT | |
| Ahy5g2349 | 5 | 96739570 | 96743510 | Ahy13g2013 | 13 | 36028170 | 36031742 | PCT | |
| Ahy5g2349 | 5 | 96739570 | 96743510 | Ahy3g1734 | 3 | 33969059 | 33972647 | PCT |