Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2317 ATGGATGAGGTTGTTGCTGCTGCTACTGCTGCTAATGCTCATAACTTTGTTAGGCAGCTCCCTCAGGGTTATGAAACCAAGATTGGAGAAAGGGGAGCACTTCTTTCAGGAGGACAAAAGCAGCGAATAGCAATTGCAAGAGCCATCATAAAGAATCCAGTGATTCTTCTTCTTGATGAAGCAACCAGTGCTCTTGACTCTGAATCTGAATTACTTGTCCAAAATGCCCTTGATCATGCCTCATTGGGCAGGACTACATTGGTTGTTGCACACAAGCTATCAACTGTCCGAAATGCAGATGTCATAGCCGTTGTCAACGCCGGTTCCATCATCGAAATCGGCACGCACAACGAGCTCATAACCCATCCAAACGGCCAATATGCAAAGCTAGCAAAACTCCAAACACAACTCAGCTTTGATGATCAACAAGAAATATCCAATGCTGTTTCTTCTGCAGCAAGAAGCAGTGCTGGTAGAACCAGCACAGCAAGATCAACAAGCCCTGCAATTTTCCAAAAATCACCAATCCCAATTGATGATAACACCATAAACCCGGAATCATCTCTTGTTTCTCACCCTTCACCTTCTTTTCCAAGGCTTCTATCTCTGAATGCACCTGAATGGAAACAATGTTTAATTGGTACTTTTTCCGCAATAGCTTTCGGCTCAGTGCAGCCCATATATGCCTTAACAATTGGTGGCATGATTTCTGCATTTTTCGCCGAAAGCCATAGTGAAATGATTCACAGAATCAGGACTTACTCTTTGATTTTCACTTCTCTTTCTCTTGCTTCCATCACACTCAACCTCTTGCAGCACTACAATTTCGCATACATGGGAGCAAGATTAACAAAAAGGATACGGCAGAGAATGCTTGAGAATATCTTAACATTCGAAACGGCTTGGTTTGATGAAGAAAATAATTCCAGTGGAGCATTGTGCTCGAGGCTAAGCAATGAGGCTTCCATGGTTAAGTCCCTTGTCGCAGATCGCGTTTCATTGCTGGTTCAAACAGCTTCTGCTGTCAGCATTGCAATGATCATAGGACTCGCCGTGGCGTGGAAGCTCGCTCTTGTGATGATAGCAGTGCAGCCACTCACAATCCTCTGCTTCTACACAAGAAAAGTTCTTCTCTCTACACTCTCATCAAAATTCATCAAGGCACAGAATCATAGCACACAGATTGCAGTTGAAGCAGTGTACAACCACAGAATTGTGACTTCATTTGGAAGCATACAAAAGGTTTTGACATTATTCGATGAAGCGCAGGAGGCACCAAGGAAGGAGGCGAGGAAGAAGTCGTGGCTGGCAGGGATTGGAATGGGGTCTGCTCAATGCCTAACATTCATGACATGGGCTTTGGATTTCTGGTATGGAGGGACATTGGTGGAGAAGAAGGATATTTCTGCAGGGGATGTGTTTAAGACATTCTTTGTTTTGGTTAGCACTGGGAAGGTCATTGCTGAAGCTGGAAGCATGACTTCTGATCTTGCAAAGTCCTCAACTGCTGTCAAATCTGTTTTTGAGATTCTTGACAGGAAATCACTTATTCCCAAGGCTGGTGATTGCAACAATGGAAGAAAGTTGGAAAATATGAGTGGGAAGATAGAACTAAAGAACGTTGATTTCGCCTACCCAAGTAGGGCAGGGACACCGATATTGCGCAAGTTTTGCTTGGAGGTGAAGGCAGGGAAGAGTATTGGGTTAGTTGGGAAGAGTGGTTGTGGAAAATCAACAGTGATTGCATTGATCCAAAGATTCTATGATGTTGAGAGAGGGTTTGTGAAAATGGACAATGTGGACATAAGGGAACTAGATATTCAATGGTATAGGCAGCACACTGCACTTGTTAGCCAAGAACCTGTCATATATTCTGGCACTGTAAGGGATAACATCTTGTTTGGGAAGCAAGATGCAACTGAGAATGAAGTTGTTGAGGCTGCAAAAGCCGCAAATGCTCATGAGTTCATATCATCATTGAAAGATGGATATGAAACAGAATGTGGAGAAAGGGGAGTGCAACTATCTGGAGGGCAAAAGCAGAGAATAGCAATAGCAAGGGCCATAATAAGGAACCCAACAATATTGCTGCTTGACGAAGCAACAAGTGCACTTGATGTTCAATCAGAACAAGTTGTGCAAGAAGCATTAGACAGGATCATGGTGGGAAGAACCACCATTGTTGTAGCACATAGGCTCAACACCATCAAAGAACTTGACTCGATTGCATATGTCTCAGAGGGTAAGGTTCTTGAGCAAGGAACCTATGCTCAACTTAGGCACAAGAGAGGTGCCTTCTTCAATCTTGCATGCCATCAAATCCAAAATTAG 2331 0.4359 MDEVVAAATAANAHNFVRQLPQGYETKIGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESELLVQNALDHASLGRTTLVVAHKLSTVRNADVIAVVNAGSIIEIGTHNELITHPNGQYAKLAKLQTQLSFDDQQEISNAVSSAARSSAGRTSTARSTSPAIFQKSPIPIDDNTINPESSLVSHPSPSFPRLLSLNAPEWKQCLIGTFSAIAFGSVQPIYALTIGGMISAFFAESHSEMIHRIRTYSLIFTSLSLASITLNLLQHYNFAYMGARLTKRIRQRMLENILTFETAWFDEENNSSGALCSRLSNEASMVKSLVADRVSLLVQTASAVSIAMIIGLAVAWKLALVMIAVQPLTILCFYTRKVLLSTLSSKFIKAQNHSTQIAVEAVYNHRIVTSFGSIQKVLTLFDEAQEAPRKEARKKSWLAGIGMGSAQCLTFMTWALDFWYGGTLVEKKDISAGDVFKTFFVLVSTGKVIAEAGSMTSDLAKSSTAVKSVFEILDRKSLIPKAGDCNNGRKLENMSGKIELKNVDFAYPSRAGTPILRKFCLEVKAGKSIGLVGKSGCGKSTVIALIQRFYDVERGFVKMDNVDIRELDIQWYRQHTALVSQEPVIYSGTVRDNILFGKQDATENEVVEAAKAANAHEFISSLKDGYETECGERGVQLSGGQKQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMVGRTTIVVAHRLNTIKELDSIAYVSEGKVLEQGTYAQLRHKRGAFFNLACHQIQN* 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2317 776 CDD ABC_6TM_Pgp_ABCB1_D2_like 201 517 - -
Ahy5g2317 776 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 134 IPR027417 -
Ahy5g2317 776 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 526 773 IPR027417 -
Ahy5g2317 776 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 536 772 IPR003439 GO:0005524
Ahy5g2317 776 SMART AAA_5 563 755 IPR003593 -
Ahy5g2317 776 SUPERFAMILY ABC transporter transmembrane region 195 513 IPR036640 GO:0005524|GO:0016021
Ahy5g2317 776 Pfam ABC transporter 13 63 IPR003439 GO:0005524
Ahy5g2317 776 Gene3D - 1 135 IPR027417 -
Ahy5g2317 776 Gene3D - 526 776 IPR027417 -
Ahy5g2317 776 Pfam ABC transporter transmembrane region 212 482 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy5g2317 776 Pfam ABC transporter 557 703 IPR003439 GO:0005524
Ahy5g2317 776 ProSitePatterns ABC transporters family signature. 675 689 IPR017871 GO:0005524
Ahy5g2317 776 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 773 IPR039421 -
Ahy5g2317 776 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 212 499 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy5g2317 776 Gene3D ABC transporter type 1, transmembrane domain 136 154 IPR036640 GO:0005524|GO:0016021
Ahy5g2317 776 Gene3D ABC transporter type 1, transmembrane domain 178 521 IPR036640 GO:0005524|GO:0016021
Ahy5g2317 776 PANTHER ABC TRANSPORTER B FAMILY MEMBER 8-RELATED 1 773 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2317 Ahy-Chr5 95896490 95901355 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2317 3 766 Calmodulin-binding Proteins AT2G36910 43.782 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2317 K05658 - gmx:100801088 1266.52