Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2314 ATGGGTTCACCCCCAAAGAATAAGGGAGAGAGGAAAATAGAGAGAGGTTCCATAGCTATAATCTTGAGATATGCAGATTGTGTTGATGTTTTGCTTATGTTAATGGGTGCTGTTGGAGCAGTTGGAGATGGCATGTCCACAAACATTCTTCTCATCTTCGCTAGCCGCATCATGAACAGCTTAGGATATGGCAACCAACAACAACAACAACAAAGTAGTGGCACTGCCAACAATTACATGTCCCAGGTTGAAAAGTGCAGCTTGTATTTTGTGTACTTGGGACTAGCAGTGATGCTGTTGGCCTTCATGGAAGGGTACTGTTGGAGTAAAACAAGTGAGAGGCAGGTGTTGAGAATTCGGTACAAATATTTGGAAGCTGTTCTAAGACAAGAAGTGGGGTTTTTTGAATCACAAGAAGCAACTACTTCTGAAATCATCAATTCCATATCAAAGGACACTTCTCTCCTCCAAGAAGTCCTAAGTGAAAAGGTGCCACTATTCTTAATGCACTCATCATCATTCATCTCTGGGATCGCTTTTGCCACCTACTTCTCATGGAGGCTGGCCTTAGTAGCATTCCCAACACTTGTTCTTCTCATAATCCCTGGCATGATCTATGGCAAATACCTAATCTATTTGTCAAAGTCATCTGCCAAGGAGTACGGGAAGGCGAACGCCATCGTCGAGCAGGCATTAAGCTCCATCAAAACCATTTATTCGTTCACGGCGGAGAGGAGAATCCTTGTGAGGTATTCAGAGATCTTAGAGAGAACCTCAAGGCTTGGAATCAAGCAAGGGATAGCAAAGGGTTTAGCTGTTGGAAGCACAGGTTTATGCTTTGCAATTTGGGCTTTTCTTGCTTGGTATGGAAGCCATTTGGTTATGTACAAAGCTGAAAGTGGTGGAAGGATCTATGCAGCTGGAATTTGCTTCATTATGAGTGGACAATCCCTTGGAGTGGTACTTCCAGATTTGAAGTACTTGACAGAAGCATCAGTAGCATCCAAAAGAATTTTCAACATGATTGACAGAAAAGCAGTAATTGATGGTGAAGACACAACAAAGGGAATAGTGCTAGACCAAATTAACGGGAACCTAGACTTCGAACATGTGAAATTCACATACCGTTCAAGACCAGACAACCTCGTACTCAATGACTTCAATCTGAGGGTTGAATCAGGCAAAACGGTTGCACTTGTTGGTGCAAGTGGGAGTGGAAAGTCAACGGCAATAGCGTTGGTGCAAAGGTTCTATGATGTGGATGAAGGTGTTGTGAGGGTTGATGGTGTTGACATAAAGAGGTTGCAGTTGAAGTGGTTGAGGGGTAAAATGGGGCTTGTGAGTCAAGAACATGCATTGTTTGGGACATCTATTAAGGAGAATATTATGTTTGGAAAGCTTGATGCTACCATGGATGAGGTTGTTGCTGCTGCTACTGCTGCTAATGCTCATAACTTTGTTAGGCAGCTCCCTCAGGGTTATGAAACCAAGATTGGAGAAAGGGGAGCACTTCTTTCAGGAGGACAAAAGCAGCGAATAGCAATTGCAAGAGCCATCATAAAGAATCCAGTGATTCTTCTTCTTGATGAAGCAACCAGTGCTCTTGACTCTGAATCTGAATTACTTGTCCAAAATGCCCTTGATCATGCCTCATTGGGCAGGACTACATTGGTTGTTGCACACAAGCTATCAACTGTCCGAAATGCAGATGTCATAGCCGTTGTCAACGCCGGTTCCATCATCGAAATCGGCACGCACAACGAGCTCATAACCCATCCAAACGGCCAATATGCAAAGCTAGCAAAACTCCAAACACAACTCAGCTTTGATGATCAACAAGAAATATCCAATGCTCTTTCTTCTGCAGCAAGAAGCAGTGCTGGTAGAACCAGCACAGCAAGATCAACAAGCCCTGCAATTTTCCAAAAATCACCAATCCCTATTGATGATAACACCATAAACCCGGAATCATCTCTTGTTTCTCACCCTTCACCTTCTTTTCCAAGGCTTCTATCTCTGAATGCACCTGAATGGAAACAATGTTTAATTGGTACTTTTTCCGCAATAGCTTTCGGCTCAGTGCAGCCCATATATGCCTTAACAATTGGTGGCATGATTTCTGCATTTTTCGCCGAAAGCCATAGTGAAATGATTCACAGAATCAGGACTTACTCTTTGATTTTCACTTCTCTTTCTCTTGCTTCCATCACACTCAACCTCTTGCAGCACTACAATTTCGCATACATGGGAGCAAGATTAACAAAAAGGATACGGCAGAGAATGCTTGAGAATATCTTAACATTCGAAACGGCTTGGTTTGATGAAGAAAATAATTCCAGTGGAGCATTGTGCTCGAGGCTAAGCAATGAGGCTTCCATGGTTAAGTCCCTTGTCGCGGATCGCGTTTCATTGCTGGTTCAAACAGCTTCTGCTGTCAGCATTGCAATGATCATAGGACTCGCCGTGGCGTGGAAGCTCGCTCTTGTGATGATAGCAGTGCAGCCACTCACAATCCTCTGCTTCTACACAAGAAAAGTTCTTCTCTCTACACTCTCATCAAAATTCATCAAGGCACAGAATCATAGCACACAGATTGCAGTTGAAGCAGTGTACAACCACAGAATTGTGACTTCATTTGGAAGCATACAAAAGGTTTTGACATTATTCGATGAAGCGCAGGAGGCGCCAAGGAAGGAGGCGAGGAAGAAGTCGTGGCTGGCCGGGATTGGAATGGGGTCTGCTCAATGCCTAACATTCATGACATGGGCTTTGGATTTCTGGTATGGAGGGACATTGGTGGAGAAGAAGGATATTTCTGCAGGGGATGTGTTTAAGACATTCTTTGTTTTGGTTAGCACTGGGAAGGTCATTGCTGAAGCTGGAAGCATGACTTCTGATCTTGCAAAGTCCTCAACTGCTGTCAAATCTGTTTTTGACATTCTTGACAGGAAATCACTTATTCCCAAGGCTGGTGATTGCAACAATGGAAGAAAGTTGGAAAATATGAGTGGGAAGATAGAATTAAAGAACGTTGATTTCGCCTACCCAAGTAGGGCAGGGACACCGATATTGCGCAAGTTTTGCTTGGAGGTGAAGGCAGGGAAGAGTATTGGGTTAGTTGGAAAGAGTGGTTGTGGAAAATCAACAGTGATTGCATTGATCCAAAGATTCTATGATGTTGAGAGAGGGTTTGTGAAAATGGACAATGTGGACATAAGGGAACTAGATATTCAATGGTATAGGCAGCACACTGCACTTGTTAGCCAAGAACCTGTCATATATTCTGGCACTGTAAGGGATAACATCTTGTTTGGGAAGCAAGATGCAACTGAGAATGAAGTTGTTGAGGCTGCAAAAGCCGCAAATGCTCATGAGTTCATATCATCATTGAAAGATGGATATGAAACAGAATGTGGAGAAAGGGGAGTGCAACTATCTGGAGGGCAAAAGCAGAGAATAGCAATAGCAAGGGCCATAATAAGGAACCCAACAATATTGCTGCTTGACGAAGCAACAAGTGCACTTGATGTTCAATCAGAACAAGTTGTGCAAGAAGCATTAGACAGGATCATGGTGGGAAGAACCACCATTGTTGTAGCACATAGGCTCAACACCATCAAAGAACTTGACTCGATTGCATATGTCTCAGAGGGTAAGGTTCTTGAGCAAGGAACCTATGCTCAACTTAGGCACAAGAGAGGTGCCTTCTTCAATCTTGCATGCCATCAAATCCAAAATTAG 3741 0.4338 MGSPPKNKGERKIERGSIAIILRYADCVDVLLMLMGAVGAVGDGMSTNILLIFASRIMNSLGYGNQQQQQQSSGTANNYMSQVEKCSLYFVYLGLAVMLLAFMEGYCWSKTSERQVLRIRYKYLEAVLRQEVGFFESQEATTSEIINSISKDTSLLQEVLSEKVPLFLMHSSSFISGIAFATYFSWRLALVAFPTLVLLIIPGMIYGKYLIYLSKSSAKEYGKANAIVEQALSSIKTIYSFTAERRILVRYSEILERTSRLGIKQGIAKGLAVGSTGLCFAIWAFLAWYGSHLVMYKAESGGRIYAAGICFIMSGQSLGVVLPDLKYLTEASVASKRIFNMIDRKAVIDGEDTTKGIVLDQINGNLDFEHVKFTYRSRPDNLVLNDFNLRVESGKTVALVGASGSGKSTAIALVQRFYDVDEGVVRVDGVDIKRLQLKWLRGKMGLVSQEHALFGTSIKENIMFGKLDATMDEVVAAATAANAHNFVRQLPQGYETKIGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESELLVQNALDHASLGRTTLVVAHKLSTVRNADVIAVVNAGSIIEIGTHNELITHPNGQYAKLAKLQTQLSFDDQQEISNALSSAARSSAGRTSTARSTSPAIFQKSPIPIDDNTINPESSLVSHPSPSFPRLLSLNAPEWKQCLIGTFSAIAFGSVQPIYALTIGGMISAFFAESHSEMIHRIRTYSLIFTSLSLASITLNLLQHYNFAYMGARLTKRIRQRMLENILTFETAWFDEENNSSGALCSRLSNEASMVKSLVADRVSLLVQTASAVSIAMIIGLAVAWKLALVMIAVQPLTILCFYTRKVLLSTLSSKFIKAQNHSTQIAVEAVYNHRIVTSFGSIQKVLTLFDEAQEAPRKEARKKSWLAGIGMGSAQCLTFMTWALDFWYGGTLVEKKDISAGDVFKTFFVLVSTGKVIAEAGSMTSDLAKSSTAVKSVFDILDRKSLIPKAGDCNNGRKLENMSGKIELKNVDFAYPSRAGTPILRKFCLEVKAGKSIGLVGKSGCGKSTVIALIQRFYDVERGFVKMDNVDIRELDIQWYRQHTALVSQEPVIYSGTVRDNILFGKQDATENEVVEAAKAANAHEFISSLKDGYETECGERGVQLSGGQKQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMVGRTTIVVAHRLNTIKELDSIAYVSEGKVLEQGTYAQLRHKRGAFFNLACHQIQN* 1247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2314 1246 CDD ABC_MTABC3_MDL1_MDL2 367 604 - -
Ahy5g2314 1246 Pfam ABC transporter 384 533 IPR003439 GO:0005524
Ahy5g2314 1246 Gene3D ABC transporter type 1, transmembrane domain 88 919 IPR036640 GO:0005524|GO:0016021
Ahy5g2314 1246 Pfam ABC transporter transmembrane region 38 300 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy5g2314 1246 Pfam ABC transporter transmembrane region 682 952 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy5g2314 1246 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 996 1243 IPR027417 -
Ahy5g2314 1246 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1006 1242 IPR003439 GO:0005524
Ahy5g2314 1246 CDD ABC_6TM_Pgp_ABCB1_D2_like 671 987 - -
Ahy5g2314 1246 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 34 330 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy5g2314 1246 Gene3D - 996 1246 IPR027417 -
Ahy5g2314 1246 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 357 604 IPR027417 -
Ahy5g2314 1246 SMART AAA_5 1033 1225 IPR003593 -
Ahy5g2314 1246 SMART AAA_5 393 619 IPR003593 -
Ahy5g2314 1246 CDD ABC_6TM_Pgp_ABCB1_D1_like 33 338 - -
Ahy5g2314 1246 Gene3D - 364 626 IPR027417 -
Ahy5g2314 1246 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 19 1243 IPR039421 -
Ahy5g2314 1246 SUPERFAMILY ABC transporter transmembrane region 21 345 IPR036640 GO:0005524|GO:0016021
Ahy5g2314 1246 PANTHER ABC TRANSPORTER B FAMILY MEMBER 8-RELATED 19 1243 - -
Ahy5g2314 1246 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 366 602 IPR003439 GO:0005524
Ahy5g2314 1246 SUPERFAMILY ABC transporter transmembrane region 665 983 IPR036640 GO:0005524|GO:0016021
Ahy5g2314 1246 ProSitePatterns ABC transporters family signature. 1145 1159 IPR017871 GO:0005524
Ahy5g2314 1246 ProSitePatterns ABC transporters family signature. 505 519 IPR017871 GO:0005524
Ahy5g2314 1246 CDD ABC_MTABC3_MDL1_MDL2 1006 1240 - -
Ahy5g2314 1246 Pfam ABC transporter 1027 1173 IPR003439 GO:0005524
Ahy5g2314 1246 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 682 969 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2314 Ahy-Chr5 95858065 95866377 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2314 77 624 Calmodulin-binding Proteins AT2G36910 35.390 8.06e-102 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2314 K05658 - gmx:100801088 2011.88