Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2296 ATGGCGATTTCAAATTCGCATTACATTTTGTGTGTTACAATAGCAATCCTTGTGATTGTTGTTCAAAATTCAAGAAGTGCATATTCCCGGCACCATGATGATGGCACTAGAAAGGGAATTCGATTGAGGAATGGATTATTGTCCAACATGAGTAGGATAGAGTTCTCGGAAGAACAGTTCATGAAATGGGTCAACTTTGTTGGTAACCTCAATCATTCAATGTTCAAGGCTGCAAAGAACAAGCTCTTTGCTTCCTACACTTTGCATGTTGATAACAACCCTGCACTTGGTGACTTCACTTCCATTCAAGACGCCATTGATTCTCTTCCTTCCATTAATCTTGTTAGAGTCCTCATCAAGGTTCATGCAGGTCTTTACACGGAGAAAGTGAGCATTCCTCAATTGAAATGGTTCATAACAATAGAAGGAGCAGGTGCAGATAAAACAATAGTTCAATATGGTGACACAGCACAAACACCTGGCTCAAATGGGAGGCCATTGGGAACCTACGGTTCTGCTACTTTTGCTGTTAATTCACCTTATTTTATTGCAAAGAACATCACATTCAAGAACACTACTCCAGTCCCTGCACCAGGAGCAATTGGGAAACAGGCAGTGGCATTCAGGATTTCAGCGGACACAGCAGCATTCTATGGATGCAGTTTCTTGGGTGCACAGGACACACTGTATGATCATATGGGAAGACATTATTATAAGGATTGTTACATTGAAGGCTCTGTTGATTTCATATTCGGAAACGCTCTCTCTCTATTTGAGGGGTGTCACGTGCATGCAATAGCACAGAATATGGGAGCAGTAACAGCGCAGGGGAGGAGTAGCATGTTGGAGGACACGGGGTTCTCATTCGTGAACTGTAAGGTCACGGGGTCAGGGGCACTATACCTGGGAAGGGCATGGGGTCCCTTTTCTCGCGTGGTATTCGCCTATACATATATGGACAACATCATCATTCCCAAAGGCTGGTATAACTGGGGTGACCCTAATCGTGAATTGACTGTATTCTATGGACAATACAAATGCACAGGAGCGGGAGCAAGCTTTGCTGGGAGGGTATCATGGTCAAGGGAACTCACTGACGATGAAGCCAAGCCTTTTCTTTCTCTTTCCTTTGTTGATGGCACGGAATGGATCAATCTTTGA 1161 0.4393 MAISNSHYILCVTIAILVIVVQNSRSAYSRHHDDGTRKGIRLRNGLLSNMSRIEFSEEQFMKWVNFVGNLNHSMFKAAKNKLFASYTLHVDNNPALGDFTSIQDAIDSLPSINLVRVLIKVHAGLYTEKVSIPQLKWFITIEGAGADKTIVQYGDTAQTPGSNGRPLGTYGSATFAVNSPYFIAKNITFKNTTPVPAPGAIGKQAVAFRISADTAAFYGCSFLGAQDTLYDHMGRHYYKDCYIEGSVDFIFGNALSLFEGCHVHAIAQNMGAVTAQGRSSMLEDTGFSFVNCKVTGSGALYLGRAWGPFSRVVFAYTYMDNIIIPKGWYNWGDPNRELTVFYGQYKCTGAGASFAGRVSWSRELTDDEAKPFLSLSFVDGTEWINL* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2296 386 ProSitePatterns Pectinesterase signature 2. 243 252 IPR033131 -
Ahy5g2296 386 PANTHER PECTINESTERASE 15 385 - -
Ahy5g2296 386 SUPERFAMILY Pectin lyase-like 84 385 IPR011050 -
Ahy5g2296 386 Pfam Pectinesterase 97 380 IPR000070 GO:0030599|GO:0042545
Ahy5g2296 386 Gene3D - 84 386 IPR012334 -
Ahy5g2296 386 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 15 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2296 Ahy-Chr5 95370724 95374565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2296 99 384 Carbohydrate Esterase AT5G47500 50.871 3.17e-102 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2296 K01051 - gmx:100793314 639.032