Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2285 ATGGACAATACCTGGAGACTTGCTTTTCTTATGATCCTCACCCTTCATTCAACCACAATAGTAGCTGAATTTGGTGTTGTTGGTGGTGTAGGTGTTGGTGTTGGTGTTGGCAATGGTGGTGGAGGAGGAGTGGTTTGGGTTGGGGGAGGGGTTAACAACCCACAACCCTCTGGATCTTCTTCAGAATCAAAGCTGGATGGAGCTTACACAGCGCTACAGGCATGGAAATCTGCAATCACTGATGACCCAAAGAAAATTCTAGGAACATGGGTTGGTCCAAATGTGTGTTCTTACAAAGGGGTTTTTTGTGATTTTACTGAAGATGAAATGGGTGCATCTGCATCAGCATTCCCTGTAGTTGCAGGCATAGATCTCAACCATGCAAATCTCCAAGGAACCCTTGTCAAAGAGCTATCTTTACTCACTGACATGTCCCTTTTCCACCTTAACAGTAACAGGTTCGCTGGTACTGTCCCTGATGAATTCAGAGACCTCAACTCTCTTGAAGAATTTGACCTCAGCAACAACCAATTCTCAGGTTCTTTCCCTTCTGCTACTTTGTACATGCCAAGCCTCATCTACTTGGACCTCAGGTTCAACTACTTCTCCGGGACAATCCCTCAAGAACTCTTCTACAAGAATCTTGATGCACTGTTTCTCAACAACAATCAATTTGAAGGTGAAATCCCTCAGAATCTTGGAAATTCCCCTGCATCAGTGATAAATTTAGCCAACAACAAGTTGAGTGGGAACATCCCAGCAAGTTTTGGATTCATGGGTTCTAAATTGAAGGAGATTCTGTTCCTGAATAACCAGTTAACTGGTTGCATCCCTGAAGGAGTGGGGCTATTCACTGAGATTCAAGTTCTGGATGTTAGCTACAATACTCTCATGGGTCATGTGCCAGACACATTGTCTTGTCTGCAAGACATTCAAGTCCTTAACTTGGCACATAACAAGCTTTCTGGGGAGTTATCAGATGTAATATGCTCTCTGAGGAGCCTTGCAAATTTGACTGTTGCTTACAATTTCTTTTCTGGGTTCAGCCAACAATGTTCAAGGCTTTTCTTCAGGAATGTGGGTTTTGATGTCTCACTTAACTGCATTCCTGGAAGGGACATGCAGAGACCTCAACCTGAGTGTTCTGTGATCCCAGGTGGTAGTCTAAGTTGTCTCAGAATTCCAACACCAAAGCCTCTTGTTTGCGGTTCCCTGGCTGTAAGTGCTTCTAAGCACACTAATTCTACTTCATCATCTCCTTGA 1263 0.4386 MDNTWRLAFLMILTLHSTTIVAEFGVVGGVGVGVGVGNGGGGGVVWVGGGVNNPQPSGSSSESKLDGAYTALQAWKSAITDDPKKILGTWVGPNVCSYKGVFCDFTEDEMGASASAFPVVAGIDLNHANLQGTLVKELSLLTDMSLFHLNSNRFAGTVPDEFRDLNSLEEFDLSNNQFSGSFPSATLYMPSLIYLDLRFNYFSGTIPQELFYKNLDALFLNNNQFEGEIPQNLGNSPASVINLANNKLSGNIPASFGFMGSKLKEILFLNNQLTGCIPEGVGLFTEIQVLDVSYNTLMGHVPDTLSCLQDIQVLNLAHNKLSGELSDVICSLRSLANLTVAYNFFSGFSQQCSRLFFRNVGFDVSLNCIPGRDMQRPQPECSVIPGGSLSCLRIPTPKPLVCGSLAVSASKHTNSTSSSP* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2285 420 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 1 420 - -
Ahy5g2285 420 Pfam Leucine rich repeat N-terminal domain 69 104 IPR013210 -
Ahy5g2285 420 PANTHER LRR/EXTENSIN 1 420 - -
Ahy5g2285 420 Gene3D Ribonuclease Inhibitor 68 236 IPR032675 -
Ahy5g2285 420 SUPERFAMILY L domain-like 69 354 - -
Ahy5g2285 420 Pfam Leucine rich repeat 148 201 IPR001611 GO:0005515
Ahy5g2285 420 Gene3D Ribonuclease Inhibitor 237 358 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2285 Ahy-Chr5 95181225 95183045 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2285 56 393 Leucine-rich Repeat extension Gene Families AT3G24480 48.837 6.86e-107 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2285 - - gmx:100775544 629.017