Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2275 ATGAAGATGATATCTGGCAAGAAAGACCCTCCAATCAGCTCTTCCAAGAATAAGTTAAAAATACTCAGCTGGCAAGAACGACGAAAACTTGAAAGAGATAGAAAGCAGAAAGAAGAGGATGAGCAAATATTAGCAAAAGTGGAAGCTCCAATACCACAATCCAACATTGGGTTTAAGCTGCTCAAACAAATGGGTTATACGCCCGGTGCTGCCCTAGGCAAAGAGGGTTTGGGTAGGGCTGAGCCAGTGGGGATTGAGATTCGACGATTGCGAGTTGGTATTGGCTTAGATGATCCTCACAAGGAGAAGAGGAAAAATGAGAAAATCATAGCTGAGAGAAAAAGGAGGAAAGAGGAGGATCTAATGCAAGACTTTGGGTTGAGACAGAAGTCGCGATGGCAGAGTAAGAGAGTTGTAGCCAATTTTCATAAGGCAAAGGTTGCCCTTGATCAATTAGAGAATAGAGAAATCATTGAACCGGAAAAGAATGAGGATGATGAAGAAGAGGAAGATGAGGAAGAGGAAGAAATAACAGAAGAGGATTTGCAAGAAGTTTTGATGAAACTGAGGGATGACCACAATTATTGCCTCTTTTGTGGATGCAAGTATGAATCAAAGGATGCTCTCTTTACCAACTGCACTGAAACCAATGAAGATGATCACTAA 666 0.4159 MKMISGKKDPPISSSKNKLKILSWQERRKLERDRKQKEEDEQILAKVEAPIPQSNIGFKLLKQMGYTPGAALGKEGLGRAEPVGIEIRRLRVGIGLDDPHKEKRKNEKIIAERKRRKEEDLMQDFGLRQKSRWQSKRVVANFHKAKVALDQLENREIIEPEKNEDDEEEEDEEEEEITEEDLQEVLMKLRDDHNYCLFCGCKYESKDALFTNCTETNEDDH* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2275 221 SMART DUF4187_2 167 221 IPR025239 -
Ahy5g2275 221 MobiDBLite consensus disorder prediction 1 20 - -
Ahy5g2275 221 PANTHER UNCHARACTERIZED 7 221 IPR039249 -
Ahy5g2275 221 SMART G-patch_5 51 97 IPR000467 GO:0003676
Ahy5g2275 221 MobiDBLite consensus disorder prediction 160 180 - -
Ahy5g2275 221 PANTHER G PATCH DOMAIN-CONTAINING PROTEIN 11 7 221 - -
Ahy5g2275 221 MobiDBLite consensus disorder prediction 153 180 - -
Ahy5g2275 221 Pfam Domain of unknown function (DUF4187) 168 221 IPR025239 -
Ahy5g2275 221 Coils Coil 163 192 - -
Ahy5g2275 221 ProSiteProfiles G-patch domain profile. 53 99 IPR000467 GO:0003676
Ahy5g2275 221 Pfam G-patch domain 53 96 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2275 Ahy-Chr5 94921253 94924019 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2275 45 95 C2H2 Transcription Factor Family AT5G26610 43.137 1.44e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2275 - - adu:107490107 373.244