Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2246 ATGGGGAGGAAGTGTTCACATTGTGGGAACATAGGGCACAATTCAAGAACATGCACAACATCACCTATGATGATGATGATGAGAGGAGGAACAACAAATAATAATAGTTTTGTAGGGCTTAGGCTCTTTGGGGTTCAACTTGATATATCATCTTCATCATGTTGTGTTGCAATGAAGAAAAGTTTTAGCATGGATTCATTGCCCTCTTCATCTTCAACAACTACTACTACTTCTTCCTTCTCATCTTCAAGATTACCCATTGATGATAACATCACCCTCAACAACAACAATAATTCTTCTGCTTTTGGCTACCTTTCAGATGGTCTCATCGTTCCCCCGCAAGACAGGAAAAAGGGAGTACCATGGACAGAAGAAGAGCACAGAACTTTCCTGGTTGGACTTGAGAAACTAGGAAAGGGTGACTGGAGAGGAATATCTAGAAACTATGTGACCACAAGGACTCCAACCCAAGTTGCAAGCCATGCTCAAAAATACTTTCTCAGATTGGCAACTATCAATAAGAAGAAGAGACGCTCAAGTCTCTTTGACTTGGTTGGCATAGGCAACAATAACACAAAAACAGAATTTCATGATGATGTTGGTGGCATATCTAATTGCAAATCAGGAGATAATTCAAGTGTAATTGTTTGTAATGAGTCAAAATTAGAAGAAGTTGTTGAGAATAATGACATTGATCATGCCACTCTATCACTTCTAGGGCGCCTTACCCCATTTCATCAAGAAATCAAATCAGATAATGACCTAAAAGTAAAAACCATTAACCATGATAATTATAATCATAATCATCAACATCAACATCAAGCTCAACCATTTTGGCCTCATCATCAACAACACATGAATTCTTCGTCGACAGTGCCTGATTTGGAGCTCACTCTTGCAGCCCCAGAAGATCAAAATAAATCAACATCCCCCAGTTCCTTCTTTTTTGGTCCAATTAGTGTTACTTAA 969 0.387 MGRKCSHCGNIGHNSRTCTTSPMMMMMRGGTTNNNSFVGLRLFGVQLDISSSSCCVAMKKSFSMDSLPSSSSTTTTTSSFSSSRLPIDDNITLNNNNNSSAFGYLSDGLIVPPQDRKKGVPWTEEEHRTFLVGLEKLGKGDWRGISRNYVTTRTPTQVASHAQKYFLRLATINKKKRRSSLFDLVGIGNNNTKTEFHDDVGGISNCKSGDNSSVIVCNESKLEEVVENNDIDHATLSLLGRLTPFHQEIKSDNDLKVKTINHDNYNHNHQHQHQAQPFWPHHQQHMNSSSTVPDLELTLAAPEDQNKSTSPSSFFFGPISVT* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2246 322 MobiDBLite consensus disorder prediction 269 322 - -
Ahy5g2246 322 PANTHER TRANSCRIPTION FACTOR KUA1 1 322 - -
Ahy5g2246 322 Gene3D - 120 172 - -
Ahy5g2246 322 SUPERFAMILY Homeodomain-like 116 170 IPR009057 -
Ahy5g2246 322 MobiDBLite consensus disorder prediction 64 83 - -
Ahy5g2246 322 ProSiteProfiles SANT domain profile. 122 170 IPR017884 -
Ahy5g2246 322 MobiDBLite consensus disorder prediction 302 322 - -
Ahy5g2246 322 ProSiteProfiles Zinc finger CCHC-type profile. 3 18 IPR001878 GO:0003676|GO:0008270
Ahy5g2246 322 MobiDBLite consensus disorder prediction 270 295 - -
Ahy5g2246 322 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 1 322 - -
Ahy5g2246 322 ProSiteProfiles Myb-like domain profile. 114 166 IPR001005 -
Ahy5g2246 322 SMART sant 118 168 IPR001005 -
Ahy5g2246 322 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 117 168 IPR006447 GO:0003677
Ahy5g2246 322 CDD SANT 121 166 IPR001005 -
Ahy5g2246 322 Pfam Myb-like DNA-binding domain 121 166 IPR001005 -
Ahy5g2246 322 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 114 170 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2246 Ahy-Chr5 94507846 94510430 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy5g2246 Myb_DNA-binding 2.40E-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2246 - - adu:107490116 576.63