Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2225 ATGAAGACGCAGCCTGAACCTGCCGCCGTCGTCGCCGTACCTAACCCCGAAGAGAAGAAGAGCATCAACCCGGAGCTATGGCAAGCGTGTGCGGGGCCGTTGGTGAACCTTCCGCCGGCGGGAACACACGTCTTCTACTTCCCTCAAGGACACAGTGAGCAGGTCGCAGCGTCTTTGAAGAAAGATGTGGATGGACAGATTCCTAACTATCCTAATCTTCCATCCAAGTTGTTGTGTCTCCTTCACAGTGTTACTTTGCATGCTGACCCAGAAACCGATGAAGTTTATGCTCAGATGACACTTCAACCTGTGCCTTCTTATGATAAGGAAGCTTTATTAAGATCAGATCTTGCTCTCAAGTCAAACAAGGCACAGCCTGAGTTTTTCTGCAAACAGCTGACAGCTAGTGATACAAGCACACATGGAGGTTTCTCTGTGCCTCGCCGAGCAGCAGAGAAAATATTCCCTCCTCTTGATTATTCTATGCAACCTCCTGCACAAGAACTTGTGGCTAGGGATTTGCATGATAATGTTTGGACTTTCCGTCATATATATCGAGGGCAACCAAAGCGCCACTTGCTTACAACTGGATGGAGTCTATTTGTCAGTGGAAAGAGGCTCTTTGCTGGAGACTCTGTTTTATTTATACGAGATGAAAAGCAGCAGCTTCTTTTGGGCATCAGGCGAGCTAACAGGCAACCAGCCAACATATCATCCTCGGTATTGTCAAGTGATAGTATGCATATTGGGATTCTTGCGGCAGCTGCTCATGCTGCTGCAAATAATAGTCCTTTTACCGTCTTTTACAATCCTAGGGCTAGTCCTTCAGAGTTTGTTATTCCTTTAGCCAAGTACTACAAGGCAGTGTACAGCCATCAAATATCACCTGGAATGCGTTTCCGAATGATGTTTGAAACCGAAGACTCAGGAACTAGAAGGTATATGGGTACAATTACAGGAATCAGTGATCTAGATCCTGTGAGATGGAAAAATTCACAATGGCGTAATTTGCAGGTTGGTTGGGATGAGTCAACTGCTGGGGAAAAGCGTAGCAGGGTTTCACTTTGGGAAATTGAACCAGTGACTGCTCCTTTTTTCATCTGCCCTCCCCCGTTCTTCAGGGCCAAGAGACCAAGACAACCAGGAATGCCTGATGATGATCCATCTGATTTCGATAATCTTTTCAAGCGGACAATGCCTTGGCTTGGTGATGATATGTGCATGAAGGATCCTCAAGGCCTACCTGGCATGAGCTTAGTTCAATGGATGAACATGCAGCAAAATCCTAGTCTTGCTAACTCAATGCAGCCTAATTATGTACCATCATTGCCTGGATCTGTTTTGCAAAATCTTCCTGGTGCAGATATTTCCCGTCAGCTGGGGTTTTCTTCTTCACAAATTCCTCAGCCTAACAATGTAGCCTTCAACACTCAGAGGCTACTTCAGACTGCACAACAACTTGATCATCTTCAGAAGCTACCGTCAGCATCTGTCAACTTGGGAACAGTGATGCAGCCGCAGCAACAGTTGGGTGATATCTCTCAACAATCTAGGCAGAACTTAGGAAGTCAAACTCTTCCACAGAGTCAAGTTCAGGCCCAGATCTTGCATCCCCAGAATCTTGTCCAAACAAACAATATTCTTCAACAGCAACAATCATCCATTCAAAACCACCAATTCAATCGAAGTGTCCCTCAGAACCCTCCACAGCAGCAGCAACAGCAACAGACAATTATGGGTCAGAATCAGCAACAAACTATGGTCCCATCTACTATACCTGACCATGTTCAACAGTTACAGATGTCTGATAATCAGATTCAGCTTCAATTGTTACAAAAGCTTCAACAGCAACAGCAAACACTCTTAGTACAACAATCTGCGCTGCAGCAGCCTTCTCAACTTGCTCAAATCCAAGATCAGCAGAGGCAACTGTTAGATGCAGCACAGAGCTTCTCTAGGTTAGTCCCTCCTGGTCAAGTGCTTGAAATTCCTCCGTTACTTCAAAATTCACTCCCAGAGAGTAATGCGATCACAAATCAAATGACAAAGGCTGGTCGGAGCAATATACATATCTCTCATTTGCCTCAGCAGCCAAAGCCTCAGCAACAATCTGGCTTGCTGCCTGAGATGTCTGGTCAAATGGCACTTCCCCCTACCCCTTCACCAAACCAGCTCTCTGCTGCTGGCAGTGGCATACTGAATGGAGCAGCTGTAGCTGGACAATCTGTAATTACTGATGATGTTCCATCTTGCTCCACCTCACCTTCTACAAATAACTCTGCCAGTGCAGTTCCATTATTGATAAATTCCCAGTTACATAGAAGCTCAATAACTGCTGATGACATGGCTCAATCTACTGCAACATTATTGAGTTCAGGTGCTTTAGAAACCATGTCATCAGGTGCAAACATGGTAAAAGATTTACAGCCCAAGTCTGAAGTCAAGCCTTCTTTAAACATCTCCAAAAATCAGAATCAAGGGAGTTTGGTTCATCAGACATACTTGAATGGTGCTGCTGCTCAAACAGATTATTTGGATACATCATCTTCGACAACTTCAGTTTGCCTATCTCAGAGTGATGCTCACATGCATCAGAATAACAACCCGATGTCTTACAATCCACAGTCTATGTTGTTTAGAGACAACAGTCAGGATGGGGAAGTTCAGGCAGATACTAGGAGTAATGTTCCATATGGCAATAATGTTGATAACCAAATGGGAATGCCATTGAATCCAGATTCTCTTTTACCCAAAGGCACAGTGGGGATGGGGAAGGATATGTCGAATAATTTCTCGTCAGGAGGTATGCTTGGGAACTACGAAAATAACAGAGATGCTCAGCAGGAACTTTCATCTTCAATGGTCTCACAAACATTTGGAGTCCCTGATATGACCTTTAATTCTATTGATTCAACAATAGATGATAGTAGCTTCTTGAATAGGGGTGGATGGGCTCCACCACCACCACCACCACCACCGCCATTGCCAGCACCACAGTTTCAGCGTATGAGGACATATACCAAGGTTTATAAACGAGGAGCTGTCGGAAGGTCCATAGACATCACTCGGTATTCAGATTATGAGGAGCTTAAACATGATCTAGCTCGCAGATTTGGCATAGAGGGCCAGCTGGAGGATCGACACAGGATAGGCTGGAAACTTGTCTATGTAGATCATGAAAATGATGTTCTACTAGTGGGAGACGACCCTTGGGAGGAGTTTGTTAATTGTGTACGCTGTATCAAGATTCTTTCTCCCCAAGAAGTACAACAGATGAGCTTGGATGGAGATTTTGGCAATGCTAGCCTTCCAAATCAAGCTTGTAGCAGCTCTGATGGTGGGAATACTTGA 3351 0.4482 MKTQPEPAAVVAVPNPEEKKSINPELWQACAGPLVNLPPAGTHVFYFPQGHSEQVAASLKKDVDGQIPNYPNLPSKLLCLLHSVTLHADPETDEVYAQMTLQPVPSYDKEALLRSDLALKSNKAQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDYSMQPPAQELVARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANISSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVYSHQISPGMRFRMMFETEDSGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRSRVSLWEIEPVTAPFFICPPPFFRAKRPRQPGMPDDDPSDFDNLFKRTMPWLGDDMCMKDPQGLPGMSLVQWMNMQQNPSLANSMQPNYVPSLPGSVLQNLPGADISRQLGFSSSQIPQPNNVAFNTQRLLQTAQQLDHLQKLPSASVNLGTVMQPQQQLGDISQQSRQNLGSQTLPQSQVQAQILHPQNLVQTNNILQQQQSSIQNHQFNRSVPQNPPQQQQQQQTIMGQNQQQTMVPSTIPDHVQQLQMSDNQIQLQLLQKLQQQQQTLLVQQSALQQPSQLAQIQDQQRQLLDAAQSFSRLVPPGQVLEIPPLLQNSLPESNAITNQMTKAGRSNIHISHLPQQPKPQQQSGLLPEMSGQMALPPTPSPNQLSAAGSGILNGAAVAGQSVITDDVPSCSTSPSTNNSASAVPLLINSQLHRSSITADDMAQSTATLLSSGALETMSSGANMVKDLQPKSEVKPSLNISKNQNQGSLVHQTYLNGAAAQTDYLDTSSSTTSVCLSQSDAHMHQNNNPMSYNPQSMLFRDNSQDGEVQADTRSNVPYGNNVDNQMGMPLNPDSLLPKGTVGMGKDMSNNFSSGGMLGNYENNRDAQQELSSSMVSQTFGVPDMTFNSIDSTIDDSSFLNRGGWAPPPPPPPPPLPAPQFQRMRTYTKVYKRGAVGRSIDITRYSDYEELKHDLARRFGIEGQLEDRHRIGWKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGNASLPNQACSSSDGGNT* 1117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2225 1116 MobiDBLite consensus disorder prediction 552 586 - -
Ahy5g2225 1116 SUPERFAMILY CAD & PB1 domains 1017 1082 - -
Ahy5g2225 1116 MobiDBLite consensus disorder prediction 978 997 - -
Ahy5g2225 1116 SMART B3_2 129 231 IPR003340 GO:0003677
Ahy5g2225 1116 SUPERFAMILY DNA-binding pseudobarrel domain 119 258 IPR015300 -
Ahy5g2225 1116 Pfam AUX/IAA family 1004 1089 IPR033389 -
Ahy5g2225 1116 PANTHER AUXIN RESPONSE FACTOR 8 1111 - -
Ahy5g2225 1116 Pfam B3 DNA binding domain 129 230 IPR003340 GO:0003677
Ahy5g2225 1116 MobiDBLite consensus disorder prediction 983 997 - -
Ahy5g2225 1116 ProSiteProfiles PB1 domain profile. 1004 1088 IPR000270 GO:0005515
Ahy5g2225 1116 CDD B3_DNA 128 220 IPR003340 GO:0003677
Ahy5g2225 1116 Gene3D - 127 230 IPR015300 -
Ahy5g2225 1116 MobiDBLite consensus disorder prediction 692 709 - -
Ahy5g2225 1116 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 8 1111 IPR044835 GO:0003677|GO:0006355|GO:0009725
Ahy5g2225 1116 Pfam Auxin response factor 255 338 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Ahy5g2225 1116 Gene3D - 999 1093 - -
Ahy5g2225 1116 Gene3D - 293 364 - -
Ahy5g2225 1116 MobiDBLite consensus disorder prediction 692 729 - -
Ahy5g2225 1116 ProSiteProfiles B3 DNA-binding domain profile. 129 231 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2225 Ahy-Chr5 94094167 94101633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2225 7 478 B3 DNA Binding Superfamily AT5G20730 68.712 0.0 641
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Ahy5g2225 B3 1.70E-19 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2225 - - ccaj:109803454 1741.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3044 15 151396729 151404077 Ahy5g2225 5 94094167 94101633 hybridization