Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2220 ATGGCACTCATCCTCGTCACCGCCGCCGTCGCCATCCTCATGATGCACAGCGTGGCCATCGGCGCCTCCGACACCGACCTCCTCCTCAAGTTCAAGGAGTCCCTTCAGGTAAACAACGACGCCTTATCGTCATGGAATTCAACAACGCCTCCATGTAACGGAGCGAAGGCGAATTGGCCTCACATTTTGTGCTATAACGGGAACACATGGGGGATAAAGCTCGAGAGGATGGGGATCAAAGGATCCATCGATGTGGACGCCTTGAAGGGTCTACCATATCTGAGGACACTTAGTCTCATGCACAATAATCTTGAAGGCTCGTGGCCGGAGCTCAACAAATTGCCGGGATTGAAGGCGATCTATCTTTCCGATAACCATTTCTCCGGAGAGATTCCGACGGATGCCTTCGCCGGTTTGCAATGGCTGAAGAAGATTTACTTGTCCAATAACAAGTTTAGTGGTCCGTTGCCAAGTTCGTTATCCACAATGCCAAGGCTTAGAGAGCTGAGGTTGGAGGGAAACCAATTCAGTGGAAATATTCCGAGTATGCCACCGACATTGAGATCAATGAGCCTCGCTGATAATAAATTACAGGGACAAATACCTTCCGATTTGACCAAGTTTCCTCGTGCATCTTTCGCCGGTAACAAAAAGCTATGTGGAGCGCCATTACGTAACAAATGTCCGTCGAATAAGACATCATTAGCGAGCATAATAGTGCTTGCTATATTTGCTGCGGTGGCAATATTTGTGATTGCAGCAGTGATAGTACTCCTTCTTCACAGAAAAAAACAAAGACAACAACGCAGAGAGCCTTCTTCTTCATTCGAGAGTCCATCAATACCGTCAAGCTTCCACAAGAAAGTAGGAGATCTTTCCGATGATGGTGGTAGCCACAGGTCTTTAAGGTCAACTGGATCTTCCCGTGGAAGCAAGAAACATAGCATGAGGTTGTCATTTGTGAAGAGGGAGGATGACAGGGAAGAGTTTGATATGCAAGATCTTTTGAAGGCCTCTGCTGAGATTTTGGGCAGTGGTTGTTACAGTTCATCCTATAAGGCTTCTTTGTTAAGTGGACCAATGGTGGTTGTGAAAAGATTCAAGCAGATGAACAATTGCAATAAGGAAGATTTTCAAGAACACATGAGAAGGATTGGGATGTTGAGTCATCCTAATTTGCTTCCTTTGGTAGCTTACTACTACAGAAGGGAAGAGAAGCTCTTGATTACTGATTTTGTTCCTAATGGCAGCTTGGCTGTTCGCCTTCACGGACACCAAGCATTGGGGCAACCAAGCCTTGATTGGCCAACAAGATTAAAGATAGTGAAAGGCATATCAAAAGGTCTTGAATATCTATACAAAGAGATGCCAAGTCTAATAGCACCACATGGACATCTAAAATCATCAAATGTTCTTCTAAATGAAAACTATGAACCAGTCCTAACAGATTATGGTTTAGTGCCAGTGATTAATCAAGAGCTTGCATCAGACATTATGGTAATTTACAAGTCACCAGAGTATTTGCAACAAGGCAGAGTTACAAAGAAGACTGATGTTTGGAGCCTTGGGATCTTAATCTTGGAGATCCTAACTGGAAAATTCCCAGCAAATTTCTTGCAACAAGGGAGAGGGAGTGAATTGAGCTTAGCAAATTGGGTTGATTCAGTTGTTCCTGAAGAGTGGAGTAGTGAGGTTTTTGATAAAGAAATGGGTGCAAGCAAAGAAAATGAGGTTGAGATGGCAAAGCTATTAAGGATTGCATTGGCTTGTTGTGAAGCTGATGTTGAAAAGAGATTGGATGTCAAAGAAGCTGTGGATAGAATCCAAGAGGTGAAGGAGAGTGGTGAAATTGATCTTAATTAA 1863 0.4385 MALILVTAAVAILMMHSVAIGASDTDLLLKFKESLQVNNDALSSWNSTTPPCNGAKANWPHILCYNGNTWGIKLERMGIKGSIDVDALKGLPYLRTLSLMHNNLEGSWPELNKLPGLKAIYLSDNHFSGEIPTDAFAGLQWLKKIYLSNNKFSGPLPSSLSTMPRLRELRLEGNQFSGNIPSMPPTLRSMSLADNKLQGQIPSDLTKFPRASFAGNKKLCGAPLRNKCPSNKTSLASIIVLAIFAAVAIFVIAAVIVLLLHRKKQRQQRREPSSSFESPSIPSSFHKKVGDLSDDGGSHRSLRSTGSSRGSKKHSMRLSFVKREDDREEFDMQDLLKASAEILGSGCYSSSYKASLLSGPMVVVKRFKQMNNCNKEDFQEHMRRIGMLSHPNLLPLVAYYYRREEKLLITDFVPNGSLAVRLHGHQALGQPSLDWPTRLKIVKGISKGLEYLYKEMPSLIAPHGHLKSSNVLLNENYEPVLTDYGLVPVINQELASDIMVIYKSPEYLQQGRVTKKTDVWSLGILILEILTGKFPANFLQQGRGSELSLANWVDSVVPEEWSSEVFDKEMGASKENEVEMAKLLRIALACCEADVEKRLDVKEAVDRIQEVKESGEIDLN* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2220 620 Pfam Protein tyrosine and serine/threonine kinase 341 606 IPR001245 GO:0004672|GO:0006468
Ahy5g2220 620 MobiDBLite consensus disorder prediction 267 318 - -
Ahy5g2220 620 Gene3D Transferase(Phosphotransferase) domain 1 413 618 - -
Ahy5g2220 620 Pfam Leucine rich repeat 115 176 IPR001611 GO:0005515
Ahy5g2220 620 Gene3D Ribonuclease Inhibitor 184 231 IPR032675 -
Ahy5g2220 620 Pfam Leucine rich repeat N-terminal domain 23 64 IPR013210 -
Ahy5g2220 620 SUPERFAMILY L domain-like 23 224 - -
Ahy5g2220 620 Gene3D Phosphorylase Kinase; domain 1 303 412 - -
Ahy5g2220 620 SUPERFAMILY Protein kinase-like (PK-like) 341 609 IPR011009 -
Ahy5g2220 620 Gene3D Ribonuclease Inhibitor 136 183 IPR032675 -
Ahy5g2220 620 Gene3D Ribonuclease Inhibitor 23 135 IPR032675 -
Ahy5g2220 620 MobiDBLite consensus disorder prediction 299 314 - -
Ahy5g2220 620 ProSiteProfiles Protein kinase domain profile. 337 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g2220 620 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 614 - -
Ahy5g2220 620 ProSiteProfiles Leucine-rich repeat profile. 93 115 IPR001611 GO:0005515
Ahy5g2220 620 PANTHER LRR RECEPTOR-LIKE KINASE 9 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2220 Ahy-Chr5 94043105 94047227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2220 4 613 Receptor kinase-like Gene Family AT5G35390 50.711 0.0 625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Ahy5g2220 PK_Tyr_Ser-Thr 7.30E-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2220 - - ccaj:109803310 753.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3052 15 151456955 151460977 Ahy5g2220 5 94043105 94047227 hybridization
Ahy13g2635 13 92215819 92218790 Ahy5g2220 5 94043105 94047227 PCT
Ahy3g2348 3 93393265 93396173 Ahy5g2220 5 94043105 94047227 PCT
Ahy5g2220 5 94043105 94047227 Ahy13g2635 13 92215819 92218790 PCT
Ahy5g2220 5 94043105 94047227 Ahy3g2348 3 93393265 93396173 PCT