Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2189 ATGGCATTTGTGATAGACTTGAACACGCAGCCATCGTTAGAAGAAATTCACTCATTTGATACCCATATTGATATGGACGATACAAATATTTGCAATAGTTCAAGCAATGATATGGACGATACAAATATTTGTAATAGTTCAAGCAATTCTGCTACAGAAACTGAGTGCACGACTGAGGTCATAATTCATCCCACCATTTCTGATGAGGAGATTCCAAAAGTGGGGATGCTATTTGGAACCCTCGAAGAAGCACGCCAATTTTACTACAACTATGCCAATAAAGTGGGATTCGAGCCTCATATAAGAAACACTAACTTCGACAAGAATGGAAGGACACCCATTAACCAATCCATACAGTGCAATAGAGATGGATACCGAACAAAGAAGAATCTGGTAACCCAAAGGTCAAACACAGTCTCATCTGTACACTGTAAAGCTCGCATCTATGTGAAACTTGACAAAGAGCTTGGAAAATGGAGACTGTCGAAAGTAGAATTGGCTCACACGCATCGGTGTGATCCTAGTTTGTCATGGATGTTCAAGAAAAATAGAGAACTCTCCATGCACGTTAAGGATGTCATTGAGCGCAACGACCAGGCTGGTATACGACCTTCGAAGACTTTTCAGGCGCTTGCTGATGAAGCTGGTGGTCGTTCTAATCTGAAATTTCTTGAGAAAGATGTTAGAAATTATATATCTGGTAAACTCCAAATCAATGGAGATAATACTGATGCGCAAGAGATGCTGGACTATTTTACCAGGATGAAAGAGCAGAACCCGAATTTCTTTTACGACATTTGTGTCTATAGTGATAATAGTCTCAAGCATGCATTTTGGGCGGATGCTCGATCAAGAGCTGCTTACGAGTATTTTGGTGACGTGGTGTCATTTGACACCACATACAAGCTCAACAAGTATGAGATGCCAGTTGCAGCATTTGTGGGTGTCAATCACCATGGAAGGTCATGTCTTTTCGGGTGTGCTTTATTGGGCAATGAAGAGACTGAGTCTTTTGAATGGCTCATGCAAACATTTATAAAATGTATGGGAAAAACATCAGATGGAATCTTAACTGACCAATGCGGGGCCATGGCAACAGCCATTCGAAATGTCATGCCAAACACCAGGCATAGATTGTGCATTTGGCACATCACGAGGAAGATACCCCATAAACTTGGAAAGTTGAGCCGATATGAAGAAATTAAAGCCACAATGCGTGGAATTATTTGGGAGTCTCATTCGCAAGAATCATTTGAAAGTTCTTGCAAATATGTCTTTCAAAGTGCAGATATCTATAATATTCGCAATATATGGGTCCCTGTTTTTCTAGAGCACGAATTTTGGGCTGATAAGGAACAACAGGAGTTGGAATGCGATGCAGCAGATAATAGGGGCCTGATCCCATGTGCCTCGAACTCTCCTATTGAGAAGCAGTTCCAATATGAGTACACGAACTGCATATTTCGCGATTTTCAAGCCGAATTTGTCAAAAAGTGCGACTACAACCTGTCTCCAAGGGTAGTGAAGGACAACCAATACTTCTATGAAGTGACTCAACAGAAGATAGTTAAATGGATGTCTATTTACAGCGAGTATGAGGTTGTGTTTTGTCCTATCTCGCACCAAGTTAGGTGCAACTGCTTCAGGTTTGAGTCATATGGTATCCTCTGTTGCCACATCCTATCGGTTTTATCCCATTGA 1701 0.4121 MAFVIDLNTQPSLEEIHSFDTHIDMDDTNICNSSSNDMDDTNICNSSSNSATETECTTEVIIHPTISDEEIPKVGMLFGTLEEARQFYYNYANKVGFEPHIRNTNFDKNGRTPINQSIQCNRDGYRTKKNLVTQRSNTVSSVHCKARIYVKLDKELGKWRLSKVELAHTHRCDPSLSWMFKKNRELSMHVKDVIERNDQAGIRPSKTFQALADEAGGRSNLKFLEKDVRNYISGKLQINGDNTDAQEMLDYFTRMKEQNPNFFYDICVYSDNSLKHAFWADARSRAAYEYFGDVVSFDTTYKLNKYEMPVAAFVGVNHHGRSCLFGCALLGNEETESFEWLMQTFIKCMGKTSDGILTDQCGAMATAIRNVMPNTRHRLCIWHITRKIPHKLGKLSRYEEIKATMRGIIWESHSQESFESSCKYVFQSADIYNIRNIWVPVFLEHEFWADKEQQELECDAADNRGLIPCASNSPIEKQFQYEYTNCIFRDFQAEFVKKCDYNLSPRVVKDNQYFYEVTQQKIVKWMSIYSEYEVVFCPISHQVRCNCFRFESYGILCCHILSVLSH* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2189 566 Pfam FAR1 DNA-binding domain 86 173 IPR004330 -
Ahy5g2189 566 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 50 453 IPR031052 GO:0006355
Ahy5g2189 566 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 471 564 IPR031052 GO:0006355
Ahy5g2189 566 PANTHER OS03G0843700 PROTEIN 50 453 - -
Ahy5g2189 566 PANTHER OS03G0843700 PROTEIN 471 564 - -
Ahy5g2189 566 ProSiteProfiles Zinc finger SWIM-type profile. 532 564 IPR007527 GO:0008270
Ahy5g2189 566 Pfam MULE transposase domain 294 386 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2189 Ahy-Chr5 92976298 92978611 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy5g2189 MULE 1.30E-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2189 - - ahf:112803761 1183.32