Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2175 ATGATTCTGATCAAAGCCCACAAGGAAGCTGGTGGAAACAAATGGGCTGAGATTTCAAAGAGATTGCCAGGTAGGACTGATAACTCCATCAAGAATCGTTGGAATACAATTAAGAGGAGTAGGCCCACAAAAAAGTTCAAGTTCATTAAGCCCAATAACAACAATAATTTTGATGGGTCAAAAATGCTCAAAGCCTATATCGATGCAGTGGCTGCAGCCCAAGCAGAAGTAGCAACTTCATCAAAGTCAAAGTCAAAGAATGATTCCAACAAGAATAAGGGCAAGGCCAGGGTTAAAATTGATCTCAATTCTATTCCCTTGGAGTTTCCAAATGATGACGTCATCAACATTCATGGAAGTGATGTTGGTGGTGAATATGGCAACTGGGTTTAG 393 0.4046 MILIKAHKEAGGNKWAEISKRLPGRTDNSIKNRWNTIKRSRPTKKFKFIKPNNNNNFDGSKMLKAYIDAVAAAQAEVATSSKSKSKNDSNKNKGKARVKIDLNSIPLEFPNDDVINIHGSDVGGEYGNWV* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2175 130 SUPERFAMILY Homeodomain-like 2 41 IPR009057 -
Ahy5g2175 130 MobiDBLite consensus disorder prediction 77 97 - -
Ahy5g2175 130 Pfam Myb-like DNA-binding domain 2 37 IPR001005 -
Ahy5g2175 130 ProSiteProfiles Myb-like domain profile. 1 38 IPR001005 -
Ahy5g2175 130 CDD SANT 2 38 IPR001005 -
Ahy5g2175 130 PANTHER MYB PROTEIN-RELATED 1 86 - -
Ahy5g2175 130 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 42 IPR017930 -
Ahy5g2175 130 PANTHER TRANSCRIPTION FACTOR MYB98 1 86 - -
Ahy5g2175 130 SMART sant 1 40 IPR001005 -
Ahy5g2175 130 Gene3D - 1 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2175 Ahy-Chr5 92703104 92703496 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2175 2 95 MYB Transcription Factor Family AT4G18770 41.489 1.45e-13 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy5g2175 Myb_DNA-binding 3.30E-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2175 K09422 - ahf:112803759 229.565