Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2163 ATGGCTTCATCATCTTCTTCTTCAAGCTACTCAAATTCTCCATGTGCGGCATGCAAGTTTTTGAGAAGAAAATGCTTACCGGATTGCATTTTCGCGCCCTATTTCCCGCCGGAAGAGCCTCAAAAATTCGCAAACGTTCACAAGATCTTCGGCGCAAGCAATGTAAGCAAGCTTCTAAATGAAGTTCAGCCTCATCAAAGGGAAGACGCGGTGAATTCTCTTGCATATGAGGCTGAAGCAAGGATCAAGGATCCAGTTTATGGTTGTGTTGGTGCAATTTCAGTGCTCCAAAGACAAGTTATTAGGCTCCAAAAGGAGCTTGATGCCACAAATGCTGATTTGATGAGATATTGCAATGAAGTTCCTAACCCTACTTTAGGAAGAAGGAATAATCATAATAATAACAACAATAATAATAATTTGGGTGAAGGAGGTGGTGGTTCTTTTTATTTCCCTTCTTCTTCTTCTTCAGCTTGGAACAATGATGATACTTGTGGTGGTGGGGATGGTTACCATAGAGGTTGA 525 0.4133 MASSSSSSSYSNSPCAACKFLRRKCLPDCIFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQRQVIRLQKELDATNADLMRYCNEVPNPTLGRRNNHNNNNNNNNLGEGGGGSFYFPSSSSSAWNNDDTCGGGDGYHRG* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2163 174 PANTHER LOB DOMAIN-CONTAINING PROTEIN 25 7 163 - -
Ahy5g2163 174 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 7 163 - -
Ahy5g2163 174 Coils Coil 93 120 - -
Ahy5g2163 174 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Ahy5g2163 174 MobiDBLite consensus disorder prediction 124 147 - -
Ahy5g2163 174 Pfam Lateral organ boundaries (LOB) domain 14 110 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2163 Ahy-Chr5 92448196 92451060 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2163 8 117 AS2 family AT3G27650 86.364 1.76e-70 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy5g2163 LOB 2.00E-42 No_clan